Real-time updates and information about key SARS-CoV-2 variants, plus the scripts that generate this information.
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Oct 1, 2025 - Python
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variants
Here are 69 public repositories matching this topic...
PEPPER-Margin-DeepVariant
nanopore variants variant-calling oxford-nanopore genome-variation long-reads pacbio-ccs assembly-polishing
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Jan 12, 2024 - Python
Odoo modules enabling dynamic product configuration
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Apr 28, 2022 - Python
Characterization of Germline variants
bioinformatics annotations clinical variants characterization pathogenicity clinvar vep diseases pathogenic-variants germline-variants exac acmg gnomad
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Mar 15, 2022 - Python
Reference implementation of the APIs defined in ga4gh-schemas. RETIRED 2018-01-24
python bioinformatics server genomics health variants global rna genome-annotation ga4gh reference-implementation alliance
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Jan 24, 2018 - Python
MyVariant.info: A BioThings API for human variant annotations
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Sep 10, 2025 - Python
ClairS-TO - a deep-learning method for tumor-only somatic variant calling
bioinformatics deep-learning nanopore genomics somatic-variants variants pacbio variant-calling somatic-mutations illumina snvs long-reads ont long-read-sequencing tumors tumor-only
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Sep 12, 2025 - Python
Bioinformatics on GCP, AWS or Azure
aws bioinformatics azure gcp gatk variants cancer-genomics genome-sequencing genome-analysis variant-calls genomics-analysis
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Sep 12, 2025 - Python
Generic human DNA variant annotation pipeline
docker workflow gene singularity vcf variants snv vep disease-gene-association indels annotation-tool vcfanno germline variant-annotations annotation-framework snvs
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Feb 13, 2024 - Python
[deprecated] 🧬 Python API to fetch gnomAD data
genomics variants bioinformatics-databases genomics-data gnomad gnomad-python-api genome-aggregation-database
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Dec 9, 2021 - Python
Command line tools for CMDB varaints browser
bioinformatics database vcf variants cmdb chinese-genome-database chinese-millionome-database genomics-api
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May 14, 2024 - Python
pathoscore evaluates variant pathogenicity tools and scores.
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Mar 25, 2022 - Python
VPOT - Variant Prioritisation Ordering Tool. VPOT is a Python tool written to allow prioritisation of variants in ANNOVAR annotated VCF files.
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Oct 27, 2021 - Python
Split a BAM file by haplotype support
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Dec 13, 2017 - Python
基于tensorflow2.x实现bert及其变体的预训练模型加载架构
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Nov 28, 2020 - Python
WebApp for DNA variants interpretation
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Sep 24, 2025 - Python
Filters for Next Generation Sequencing
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Oct 31, 2024 - Python
Clinical machine-learning based interpreter of germline mutations.
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Mar 13, 2025 - Python
A MatchMaker Exchange server
gene variants matchmaker score matchmaking diagnosis similarity-score hpo-similarity patients omim matching-algorithm matchmaking-server patient-matching
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Jul 24, 2025 - Python
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