Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls
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Mar 19, 2021 - HTML
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variant-calls
Here are 10 public repositories matching this topic...
A flexible, scalable, and reproducible pipeline to automate variant calling from raw sequence reads, with lots of bells and whistles.
snakemake variant-calling population-genetics variant-calls snakemake-workflow pool-sequencing ancient-dna evolve-and-resequence genomic-variant-calling
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Dec 17, 2024 - Python
🔧 Simple script in python to convert CSV files to VCF
python converter csv tools script phone-number contacts python3 vcf vcard email-template contact moduland phonebook contacts-app variant-calls contacts-manager comma-separated-values contacts-book phonebooks
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Mar 22, 2024 - Python
Bioinformatics on GCP, AWS or Azure
aws bioinformatics azure gcp gatk variants cancer-genomics genome-sequencing genome-analysis variant-calls genomics-analysis
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Jun 23, 2024 - Shell
Intersect multiple VCF files with haplotype awareness
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Mar 14, 2021 - Python
🐍 DRAGEN Tumor/Normal workflow post-processing
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Sep 18, 2023 - Python
PySeqArray: data manipulation of whole-genome sequencing variants with SeqArray files in Python (pre-release version)
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Aug 25, 2017 - C++
An implementation of a generic ArrayList and a generic LinkedList in cpp which can store multiple data type variables.
data-structure cpp17 variant variant-calls data-structures-algorithms arraylist arraylistassignments data-structure-cpp multiple-data-type
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Dec 21, 2023 - C++
COVID-19 Variants Repository
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Nov 18, 2020
From second generation sequencing reads to variant calls
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Nov 25, 2015 - Makefile
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