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quast
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Run multiple metagenome filtering programs using Docker containers
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Aug 4, 2023 - Shell
The repository contains a comprehensive pipeline for genome assembly and quality assessment, designed for genomic data analysis. It integrates various bioinformatics tools for accurate genome assembly.
spades fastp quast nextflow-pipeline dynamic-command-construction-for-preprocessing scalability-across-computational-environments a-detailed-demonstration-of-naming-consistency trimming-combinations
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Jun 15, 2024 - HTML
🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics
phylogenetics beta-diversity microbial-communities blast spades differential-abundance-analyses fastq-files refseq alpha-diversity prokka quast kraken2 abricate lab-journal maaslin2 shotgun-metagenomics fastani humann3 virsorter2
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Dec 23, 2024 - HTML
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