2021.10

[javierggt]

ska3-matlab 2021.10

This PR includes:

• Addition of the new bad pixel region to starcheck
• acisfp_check changes already briefed in AUG3021A load review.
• attitude tool updates in Ska.Sun and Quaternion
• updated planet plotting supported with changes in chandra_aca, proseco, and starcheck
• starcheck also includes a change to read the ACA model from chandra_models via get_xija_model_spec (starcheck was set to read the limits from that but needed another tiny update to get the model from it)
• collection of tiny incremental changes

Interface Impacts:

None

Testing:

• Automated tests (rc3).

The latest release candidates will be installed in /proj/sot/ska3/test on HEAD, and all release candidates will be available for testing from the usual channels:

conda create -n ska3-flight-2021.10rc# --override-channels \
  -c https://icxc.cfa.harvard.edu/aspect/ska3-conda/flight \
  -c https://icxc.cfa.harvard.edu/aspect/ska3-conda/test \
  ska3-flight==2021.10rc#

Review

All operations critical or impacting PR's are independently and carefully reviewed. For other PR's the level of detail for review is calibrated to operations criticality. Some PR's that are confined to aspect-team-specific processing may have little to no independent review.

Deployment

ska3-matlab 2021.10 will be promoted to flight conda channel and installed on GRETA Linux after approval from FOT team.

Code changes

New Packages

• fot-matlab 1.0.0

Updated Packages

• acdc: 4.7.4 -> 4.8.0 (4.7.4 -> 4.8.0)
  • PR 62 (jeanconn): Update warm pix notebook
  • PR 64 (taldcroft): Scale the testing cal to the kwarg guide tccd for the observations
• acisfp_check: 3.5.1 -> 3.6.0 (3.5.1 -> 3.6.0)
  • PR 32 (jzuhone): 2021 ACIS FP recalibration
• acispy: 2.1.0 -> 2.2.0 (2.1.0 -> 2.2.0)
  • PR 8 (jzuhone): Replace Chandra.Time with CxoTime
• agasc: 4.11.2 -> 4.11.4 (4.11.2 -> 4.11.3 -> 4.11.4)
  • PR 118 (javierggt): Skip processing if there are no observations to process
  • PR 123 (javierggt): add link to supplement diff in email notifications
  • PR 126 (taldcroft): Make sure observations with status=0 are not flagged suspect
  • PR 124 (javierggt): remove existing obs_status file if it is not going to be replaced
  • PR 125 (javierggt): Enhanced output obs_status to include maxmag
• chandra_aca: 4.32.1 -> 4.33.0 (4.32.1 -> 4.33.0)
  • PR 117 (taldcroft): Add a few validation notebooks
  • PR 118 (taldcroft): Fix bug where centroid_fm was modifying input image
  • PR 116 (taldcroft): Planet improvements
• hopper: 4.5.1 -> 4.5.2 (4.5.1 -> 4.5.2)
  • PR 22 (taldcroft): Fix get_backstop_cmds to work on Windows
• mica: 4.26.1 -> 4.27.1 (4.26.1 -> 4.27.0 -> 4.27.1)
  • PR 259 (taldcroft): Add get_star_stats single-star method for acq/gui stats and remove Sybase from mica.web.star_hist
  • PR 261 (jeanconn): Add two new obsids to bad list
  • PR 262 (jeanconn): Skip tests if obspar data dirs not present
• perigee_health_plots: 0.1.3 -> 0.2.1 (0.1.3 -> 0.2.0 -> 0.2.1)
  • PR 19 (jeanconn): Update ccd temp warning limit for -6.5C planning limit
  • PR 20 (jeanconn): Get ACA model from chandra_models repo via xija code
• proseco: 5.2.1 -> 5.3.0 (5.2.1 -> 5.3.0)
  • PR 361 (taldcroft): Pass catalog date to plotting so planets are drawn
  • PR 366 (taldcroft): Improve handling for missing required args
  • PR 367 (taldcroft): Add duration and target_name attributes to ACACatalog
• quaternion: 3.6.0 -> 4.0.1 (3.6.0 -> 4.0.0 -> 4.0.1)
  • PR 34 (taldcroft): Add a link to the Matrix and Quaternions FAQ
  • PR 36 (taldcroft): Add rotate_about_vec method
  • PR 37 (taldcroft): Make Quat behave more like ndarray (item access, iteration, reshaping etc)
  • PR 38 (taldcroft): Copy astropy shapes
• ska.engarchive: 4.53.0 -> 4.53.1 (4.53.0 -> 4.53.1)
  • PR 220 (taldcroft): Add information about remote access and scripts
  • PR 221 (taldcroft): New NOTES file for a bad ingest + gap process update
• ska.sun: 3.6.0 -> 3.7.0 (3.6.0 -> 3.7.0)
  • PR 16 (taldcroft): Add utility functions, add units tests and package properly
  • PR 17 (taldcroft): PEP8 compliance
• ska3-core: 2021.7 -> 2021.8
• ska_sync: 4.9.0 -> 4.9.1 (4.9.0 -> 4.9.1)
  • PR 28 (taldcroft): Add ATTITUDE.txt to mission planning products syncing
• sparkles: 4.12.0 -> 4.12.2 (4.12.0 -> 4.12.1 -> 4.12.2)
  • PR 158 (jeanconn): Handle NoneType self.mons from a pickle
  • PR 159 (taldcroft): Fix checking guide count when monitors are present
  • PR 160 (jeanconn): Fix test failure from PR Remove conda package from ska3-core #159
• starcheck: 13.10.0 -> 13.12.0 (13.10.0 -> 13.11.0 -> 13.12.0)
  • PR 372 (jeanconn): Date and increment version of checklist
  • PR 373 (jeanconn): Add suspect bad pixel region to bad pixels
  • PR 374 (jeanconn): Get ACA planning and penalty limits from chandra_models
  • PR 375 (jeanconn): Plot track of planets
  • PR 376 (jeanconn): Get the ACA thermal model with get_xija_model_spec
• xija: 4.23.0 -> 4.24.0 (4.23.0 -> 4.23.1 -> 4.24.0)
  • PR 109 (taldcroft): This fixes a bug that was missed in the recent gui_fit PR
  • PR 110 (taldcroft): Set the default repo_path inside the get_model_spec function
  • PR 111 (taldcroft): Use the right repo path to get available model names
  • PR 112 (taldcroft): Two new functions to handle limit strings, minor viz fixes for xija_gui_fit
  • PR 113 (jzuhone): Fixing bugs in limits implementation and adding them to the model info window in xija_gui_fit

Related Issues

Fixes #704
Fixes #706