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Video conference meetings Agenda for the week

ljgarcia edited this page Apr 5, 2020 · 14 revisions

Kickoff meeting

  • Day: Sunday 5th of April
  • Time: 2pm CEST (5:00am PDT, 6:00am MDT, 7:00am SAPST, 8:00am EDT, 9:00am BT, 12:00pm GMT, 1:00pm BST, 2:00pm CEST, 3:00pm EEST, 5:00pm PST, 5:30pm IST, 7:00pm IT, 8:00pm SST, 9:00pm JST, 11:00pm AEDT, Sat 04-04 1:00am NZDT)
  • Where: Webinars, details updated soon
  • How long: From 60 to 90 minutes

Slides: Google slides

Note: Coordinators, please add your topic to the slides. We have prepared already a template slide for each topic

  • Introduction (organizers)
  • BioHackrXiv (organizers)
  • CoC (Jennifer Harrow)
  • Webinars (Jennifer Harrow)
  • Topics (coordinators)
    • 2-3 minutes, 1 slide, coordinator or delegate (Please add the presenter name on the list after this agenda)
    • Questions &answers: Via slack, channel #qa
  • Other ways to contribute and future events (Jennifer Harrow)

Topic presenters - kickoff

  • FAIR Data #fair_data
  • Ontology #ontology
  • Pangenome #pangenome
  • Pangenome Browser #pangenome_browser
  • Workflows #workflows (Michael Heuer)
  • Workflow Hub
  • Machine Learning #machinelearning
  • Knowledge Graph / Knowledge Graphs for COVID-19 # kgs
  • Text Mining & Analysis
  • Wikidata et al. #wikidata
  • Bio statistics #biostats
  • Policy: moved to RDA working group
  • Virtual Screening # htvs
  • Tracking #tracking
  • Covid 19 Phylogeny #phylogeny
  • Annotations on Structures #annotations-on-structures
  • Translation #translation - Leyla Garcia
  • Web Development
  • Serratus: Deep homology search for Coronaviridae #serratus
  • Scientific software packaging using Debian irc://irc.debian.org/debian-med
  • Gene Expression #geneexpression
  • Home Learning
  • Public sequence resource #public_sequence_resource

Webinars

  • Tuesday Galaxy (not confirmed)
  • Wednesday CWL webinar (Michael Crusoe, confirmed)
  • Thursday Arvados (not confirmed)
  • Anyone else? Please let is know at the #general channel
  • Friday BioHackrXiv submissions (Tentative)

Podcasts

  • We have been invited to participate on podcasts episodes for Open Science
  • Coordinators, please let us know if you would like to have a podcast on your topic, we might approach some of you in any case.

Daily updates

  • Time: 2pm CEST (5:00am PDT, 6:00am MDT, 7:00am SAPST, 8:00am EDT, 9:00am BT, 12:00pm GMT, 1:00pm BST, 2:00pm CEST, 3:00pm EEST, 5:00pm PST, 5:30pm IST, 7:00pm IT, 8:00pm SST, 9:00pm JST, 11:00pm AEDT, Sat 04-04 1:00am NZDT)
  • Where: Webinars, details updated soon
  • How long: About 30 minutes
  • On demand, let us know by 9am CEST via coordinators whether your topic/group want to present an update
  • 1 minute per group
  • Ideas
    • Short update
    • Highlight if needed contribution from other projects

Mid-term

  • Day: Wednesday the 8th of April, 2020
  • Time: 2pm CEST (5:00am PDT, 6:00am MDT, 7:00am SAPST, 8:00am EDT, 9:00am BT, 12:00pm GMT, 1:00pm BST, 2:00pm CEST, 3:00pm EEST, 5:00pm PST, 5:30pm IST, 7:00pm IT, 8:00pm SST, 9:00pm JST, 11:00pm AEDT, Sat 04-04 1:00am NZDT)
  • Where: Webinars, details updated soon
  • How long: From 60 to 90 minutes
  • Similar to daily updates but again from 2 to 3 minutes per topic and we invite all topics to present

Topic presenters mid-term

  • FAIR Data #fair_data
  • Ontology #ontology
  • Pangenome #pangenome
  • Pangenome Browser #pangenome_browser
  • Workflows #workflows
  • Workflow Hub
  • Machine Learning #machinelearning
  • Knowledge Graph / Knowledge Graphs for COVID-19 # kgs
  • Text Mining & Analysis
  • Wikidata et al. #wikidata
  • Bio statistics #biostats
  • Policy: moved to RDA working group
  • Virtual Screening # htvs
  • Tracking #tracking
  • Covid 19 Phylogeny #phylogeny
  • Annotations on Structures #annotations-on-structures
  • Translation #translation
  • Web Development
  • Serratus: Deep homology search for Coronaviridae #serratus
  • Scientific software packaging using Debian irc://irc.debian.org/debian-med
  • Gene Expression #geneexpression
  • Home Learning
  • Public sequence resource #public_sequence_resource

Wrap-up

  • Day: Wednesday the 8th of April, 2020
  • Time: 2pm CEST (5:00am PDT, 6:00am MDT, 7:00am SAPST, 8:00am EDT, 9:00am BT, 12:00pm GMT, 1:00pm BST, 2:00pm CEST, 3:00pm EEST, 5:00pm PST, 5:30pm IST, 7:00pm IT, 8:00pm SST, 9:00pm JST, 11:00pm AEDT, Sat 04-04 1:00am NZDT)
  • Where: Webinars, details updated soon
  • How long: From 60 to 90 minutes
  • Similar to mid-term but presenting outcomes (2 to 3 minutes per topic and we invite all topics to present)

Topic presenters wrap-up

  • FAIR Data #fair_data
  • Ontology #ontology
  • Pangenome #pangenome
  • Pangenome Browser #pangenome_browser
  • Workflows #workflows
  • Workflow Hub
  • Machine Learning #machinelearning
  • Knowledge Graph / Knowledge Graphs for COVID-19 # kgs
  • Text Mining & Analysis
  • Wikidata et al. #wikidata
  • Bio statistics #biostats
  • Policy: moved to RDA working group
  • Virtual Screening # htvs
  • Tracking #tracking
  • Covid 19 Phylogeny #phylogeny
  • Annotations on Structures #annotations-on-structures
  • Translation #translation
  • Web Development
  • Serratus: Deep homology search for Coronaviridae #serratus
  • Scientific software packaging using Debian irc://irc.debian.org/debian-med
  • Gene Expression #geneexpression
  • Home Learning
  • Public sequence resource #public_sequence_resource
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