Technology-invariant pipeline for spatial omics analysis that scales to millions of cells (Xenium / Visium HD / MERSCOPE / CosMx / PhenoCycler / MACSima / etc)
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Aug 1, 2025 - Python
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spatialdata
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GeoTile is the python library for tiling the geographic raster data (eg. Tiff etc)
python tiles tiff gis tiling raster remote-sensing satellite-imagery map-tiles spatialdata geotiler tiling-image geotile gistile tiff-tile
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Sep 9, 2024 - Python
Interoperability between SpatialData and the Xenium Explorer
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Jul 31, 2024 - Python
Download and Convert METASPACE datasets to common formats such as AnnData or SpatialData
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Mar 16, 2024 - Python
A modern Python library for converting Mass Spectrometry Imaging (MSI) data into standardized SpatialData/Zarr format, enabling seamless integration with spatial omics analysis workflows.
bioinformatics scientific-computing mass-spectrometry msi bruker data-conversion imzml omics-data-integration mass-spectrometry-imaging zarr spatialdata spatial-omics
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Aug 2, 2025 - Python
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