A tool to raise the quality of viral genomes assembled from short-read metagenomes via resolving and joining of contigs fragmented during de novo assembly.
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Aug 8, 2024 - Python
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short-read-sequencing
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KOMB is a tool for fast identification of unitigs of interest in metagenomes. KOMB introduces the concept of a Hybrid Unitig Graph (an extension to compacted de Bruijn graphs) and relies on k-core and K-truss decomposition algorithms.
metagenomics
metagenomic-analysis
anomaly-detection
metagenomic-pipeline
k-core-decomposition
short-read-sequencing
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Sep 28, 2023 - C++
Telomeric Repeat motif Identification tool with Short-read sequencing
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Updated
Mar 11, 2024 - C++
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