A Python application to find and classify tetrads and quadruplexes in DNA/RNA 3D structures
-
Updated
Nov 4, 2024 - Python
#
quadruplexes
Here are 6 public repositories matching this topic...
G4-iM Grinder is a fast, robust and highly adaptable algorithm. It is capable of locating, identifying, qualifying and quantifying DNA and RNA potential quadruplex structures, such as G-quadruplex, i-Motifs and their higher order versions.
-
Updated
Jun 10, 2021 - R
The official python version of ImGQfinder: http://imgqfinder.niifhm.ru/ A tool that finds gquadruplexes and imotifs.
-
Updated
Jan 24, 2022 - Python
Practical and home works in the discipline Bioinformatics.
python
bioinformatics
snps
phylogenetic-trees
hi-c
genome-annotation
histone-modifications
rna-seq-analysis
genome-analysis
genome-assembly
sequence-alignment
quadruplexes
gene-prediction
single-cell-rna-seq
genetic-map-visualization
chromhmm
methylation-analysis
-
Updated
Sep 25, 2023 - HTML
quadraG: a fast multithreading based tool to detect G-quadruplexes in genome or transcriptome sequences
-
Updated
Mar 11, 2020 - Perl
Farida Hanna Campbell 2023
-
Updated
Jan 15, 2024 - Jupyter Notebook
Improve this page
Add a description, image, and links to the quadruplexes topic page so that developers can more easily learn about it.
Add this topic to your repo
To associate your repository with the quadruplexes topic, visit your repo's landing page and select "manage topics."