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plink2
Here are 8 public repositories matching this topic...
An integrated pipeline for analysis and visualization of Population Structure and Relatedness based on genome-wide genetic variant data
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Updated
Apr 6, 2023 - R
LocusZoom in Jupyter notebooks
bioinformatics
gwas
jupyter
genetics
plink
jupyterlab
locuszoom
jupyterlab-extension
plink2
genome-wide-association-studies
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Updated
Jul 20, 2023 - TypeScript
gwas workflow from raw intensity data to in-silico functional mapping
gwas
plink
imputation
meta-analysis
illumina
phasing
emmax
heritability
fine-mapping
saige
haplotype
genotype-imputation
plink2
gencall
idat-to-vcf
idat2vcf
functional-gwas
bolt-lmm
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Updated
Aug 21, 2024 - Shell
Interactive visualization of population genetics data for ~10,000 modern and ancient individuals.
python
heroku
bioinformatics
pca-analysis
bokeh
population-genetics
umap
bokeh-server
admixtools
plink2
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Updated
Nov 5, 2022 - Python
Very basic Snakemake workflow
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Updated
Sep 9, 2020 - Python
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