A Tool to Annotate and Prioritize Exome Variants
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Dec 19, 2024 - Java
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phenotypes
Here are 80 public repositories matching this topic...
An NLP framework for clinical phenotyping. Docker | Python | Solr | OMOP. http://claritynlp.readthedocs.io/en/latest/
nlp docker natural-language-processing mongodb solr luigi phenotype phenotypes clinical-research clinical-quality-language nlpql clinical-phenotyping
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Mar 28, 2024 - Jupyter Notebook
Repository for the GA4GH phenopacket schema
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Sep 19, 2024 - Java
API for linked biological knowledge
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Apr 26, 2022 - Python
Phenotype comparison tools using semantic similarity.
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Apr 22, 2024 - Python
PATO - the Phenotype And Trait Ontology
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Dec 1, 2024 - Makefile
Learn interpretable computational phenotyping models from k-merized genomic data
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Aug 9, 2022 - Python
A phenotype-based tool for variant prioritization in WES and WGS data
variants disease phenotypes variant-annotations variant-analysis omim vcf-files translationalscience prioritize-disease-variants rare-variants synthetic-genomes
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Nov 21, 2022 - Java
source files for OBA (Ontology of Biological Attributes)
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Nov 26, 2024 - Jupyter Notebook
Python library for extracting HPO encoded phenotypes from text
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Apr 22, 2024 - Python
R package for epigraphdb
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Jul 6, 2024 - R
phenol: Phenotype ontology library
java genomics ontologies phenotypes monarchinitiative phenomics human-phenotype-ontology mammalian-phenotype-ontology
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Jul 10, 2024 - Java
Flexible analysis of high-content CRISPR screening
crispr-analysis crispr phenotypes crispr-cas9 functional-genomics ngs-analysis perturbation-screen sequencing-data crispr-cas12
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Dec 19, 2024 - Python
Internationalisation of the HPO content
language translation semantic-web ontology phenotyping phenotypes hpo hpo-translations phenomics phenotype-ontologies obofoundry
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Feb 27, 2023
nlp go robot media knowledge-graph named-entity-recognition microbiology metabolism traits phenotypes data-modeling environments chemicals chebi envo oaklib anatomical-knowledge ncbitaxonomy cell-shapes
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Dec 18, 2024 - Jupyter Notebook
Germinate is an open source plant database infrastructure and application programming platform on which complex data from genetic resource collections can be stored, queried and visualized.
mysql website vuejs database genetics climate-data phenotypes pedigree genotypes plant-genetic-resources germinate chemical-compounds
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Dec 16, 2024 - Vue
ProCyon: A multimodal foundation model for protein phenotypes
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Dec 22, 2024 - Python
ComptoxAI - An artificial Intelligence toolkit for computational toxicology
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Aug 19, 2024 - Python
Fission Yeast Phenotype Ontology
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Dec 5, 2024 - Makefile
The phenogrid widget
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Mar 4, 2023 - JavaScript
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