A GLUE project developed to support genomic surveillance of Rabies Virus (RABV).
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Updated
May 27, 2024 - JavaScript
A GLUE project developed to support genomic surveillance of Rabies Virus (RABV).
Gallery for GEViT Project
Dr. Buqing Yi
Cluster Investigation & Virus Epidemiology Tool
Automated genomic analysis of SARS-CoV-2 sequence data
Screen plasmids for carbapenemase resistance genes, and classify using MOB Suite
Scripts and data for the CoVaRR-Net Pillar 6 notebook
BA.2.86 project with Sigal lab
Efficiently store FASTA sequences in sqlite compressed with sidecar zstd dictionary
Data used for analyses in "Genomic Surveillance Reveals Multiple Introductions of SARS-CoV-2 into Northern California" (Deng et al., Science, 2020) https://doi.org/10.1126/science.abb9263
Data used for analyses in "Genomic Epidemiology of SARS-CoV-2 in Guangdong Province, China" (Lu et al., Cell, 2020) https://doi.org/10.1016/j.cell.2020.04.023
mGEMS Genomic epidemiology with mixed samples
Official place for proposals and details around monkeypox virus lineage designations
Nextstrain build for mpox virus
Pathogen NGS Documentary
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