de-bruijn-graphs

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Here are 3 public repositories matching this topic...

mcveanlab / Corticall

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Germline DNM caller based on LdBG assembly of pathogens

links genome traversal connectivity java-api variant-calling cortex de-bruijn-graphs denovo-assembly class-library

Updated May 11, 2020
Java

jiajunhe98 / Gene-Assembing-Program

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A program which can assembing .fasta file generated by Next Generation Sequencing(NGS) de novo using De Bruijn Graph Algorithm, and can also choose to map(BLAST) the contigs to a reference sequence

gui ngs next-generation-sequencing de-bruijn-graphs

Updated Oct 9, 2020
Java

DenisVerkhoturov / metamer

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Genome assembler de novo that uses De Bruijn graph.

cli bioinformatics genome-assembly de-bruijn-graphs de-novo-assembly

Updated Jul 23, 2019
Java

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de-bruijn-graphs

Here are 3 public repositories matching this topic...

mcveanlab / Corticall

jiajunhe98 / Gene-Assembing-Program

DenisVerkhoturov / metamer

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