multilabel classification of EHR notes
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Jul 21, 2020 - Python
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clinical-notes
Here are 20 public repositories matching this topic...
📰 High-performance tool for negation and uncertainty detection in radiology reports
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Jul 16, 2023 - Python
MEDIQA-Chat Shared Tasks @ ACL-ClinicalNLP 2023
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May 15, 2023 - Python
BERT for TCM clinical records classification. JAMIA 2019
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Dec 13, 2019 - Python
Implementation of Deep Patient Representation of Clinical Notes at Intensive Care Unit for Multi-Task Prediction
deep-learning convolutional-neural-networks clinical-notes mimic-iii mortality-prediction multi-task-prediction
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Jul 26, 2019 - Python
A Multimodal Transformer: Fusing Clinical Notes With Structured EHR Data for Interpretable In-Hospital Mortality Prediction
transformer ehr clinical-notes mortality interpretability interpretable-ai multimodal mortality-prediction clinical-variables
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Jul 26, 2022 - Python
Rare disease identification from free-text clinical notes with ontologies and weak supervision
ontology weak-supervision clinical-notes mimic-iii ontology-matching umls entity-linking rare-disease ordo discharge-summaries
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May 6, 2023 - Python
Extracting Patients' information from clinical notes and export them to an OMOP CDM database.
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Jul 14, 2021 - Python
GERNERMED is the first open neural NER model for medical entities designed for German data.
nlp natural-language-processing information-extraction spacy named-entity-recognition clinical-notes ner nlp-machine-learning medical-informatics
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Oct 20, 2023 - Python
GPTNERMED is a language model-generated, synthetic dataset and an open neural NER model for medical entities designed for German data.
nlp natural-language-processing german information-extraction spacy dataset transformer named-entity-recognition gpt clinical-notes ner language-model nlp-machine-learning medical-informatics
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Oct 5, 2023 - Python
GERNERMED++ is a transfer-learning-based open neural NER model for medical entities designed for German data.
nlp natural-language-processing information-extraction spacy named-entity-recognition clinical-notes ner nlp-machine-learning slot-filling medical-informatics
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Oct 20, 2023 - Python
Deep learning for cancer symptoms monitoring on the basis of EHR unstructured clinical notes
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Apr 6, 2022 - Python
Code and Datasets for the paper "TransICD: Transformer Based Code-wise Attention Model for Explainable ICD Coding", accepted by AIME 2021.
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Mar 29, 2021 - Python
Repository of FHIR and annotation resources used to benchmark NLP Sandbox tools
nlp benchmarking data annotation rest-api db fhir clinical-notes patients clinical-data nlp-sandbox sage-bionetworks
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Oct 8, 2022 - Python
A tool for automatically labelling discharge summaries into disease categories.
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Oct 2, 2023 - Python
Estimate sentiment in clinical notes via keywords or deep learning models
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Sep 30, 2023 - Python
The deployment of Artificial Intelligence for the understanding of common text-based tasks in the healthcare sector is key to extraordinary advancement. Electronic Health Records (EHR) are stored in the health care system in an unstructured and categorically distributed way. We have a ICD-9 Labeled data which is being used to find attention on c…
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Oct 24, 2023 - Python
Research Practical and Master Thesis topic for the University of Luxembourg. Natural language processing pipeline to extract HPO terms from clinical notes or EHR, annotate genes and diseases to the extracted terms and prioritize them by their frequency.
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Dec 23, 2020 - Python
MedNLI Is Not Immune: Natural Language Inference Artifacts in the Clinical Domain (ACL-IJCNLP '21)
clinical-notes mimic-iii natural-language-inference nlp-machine-learning clinical-nlp mednlp adversarial-filtering annotation-artifacts
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Aug 6, 2021 - Python
Vocabulary-based detection of fall events in Dutch clinical notes.
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Dec 10, 2020 - Python
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