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Seurat v4.0.5#5203

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mojaveazure merged 28 commits intomastersatijalab/seurat:masterfrom developsatijalab/seurat:developCopy head branch name to clipboardOct 19, 2021

+164-107

Commits

Commits on Aug 13, 2021

• Improve documentation for sample.tree

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Commits on Aug 27, 2021

• Update to.upper documentation; #4576

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• Update release notes and dev version

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• Merge pull request #595 from satijalab/doc/toupper

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• Add concept to rdoc for RunSPCA

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• Merge branch 'develop' into docs/runspca

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• Add concept tags

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• Update NEWS; bump version

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• Merge branch 'develop' into doc/sampletree

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• Merge pull request #596 from satijalab/docs/runspca

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Commits on Sep 3, 2021

• Merge pull request #593 from satijalab/doc/sampletree

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Commits on Sep 10, 2021

• remove uwot correlation checking

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• bump version, update NEWS

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• Update NEWS.md

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• Merge pull request #598 from satijalab/fix/uwot_correlation

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Commits on Oct 4, 2021

• Wrap examples and tests that use suggested packages in namespace guards

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• Bump deveop version

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• Merge pull request #5160 from satijalab/fix/condtest

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• Prepare Seurat v4.0.5

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• Update URLs

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• Update CRAN comments

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Commits on Oct 5, 2021

• Wrap examples in namespace check

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• Merge branch 'fix/condtest' of github.com:satijalab/seurat-private into fix/condtest

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• Merge pull request #600 from satijalab/fix/condtest

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Commits on Oct 7, 2021

• Only run cluster tree examples when ape is installed

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• Don't use suggested packages

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Commits on Oct 19, 2021

• Merge pull request #5161 from satijalab/release/4.0.5

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• Merge branch 'master' into develop

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