Issue #2195 - Add logicalResourceIds param to $reindex operation #2474
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
#2322 - mutate the exit status during Mapping failure - add test for $import of missing file Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
#2400 Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
…/operation/everything/EverythingOperation.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com> Co-authored-by: Lee Surprenant <lmsurpre@us.ibm.com>
Patient/$everything without a patientId results in a Null response. #2400
issue 2405 fixed concurrent updates to correctly return 409 on version conflict
issue 2405 fix version concurrency issue for Derby
Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
…h/load/ImportJobListener.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com> Co-authored-by: Lee Surprenant <lmsurpre@us.ibm.com>
issue 2420 set Derby isolationLevel to avoid deadlock during ingestion
Error on bulk data status call where import did not import anything.
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
Previously this was flagged as a db2-only test, which helped contribute to us missing this issue. Additionally, this test was written to highlight a potential issue but didn't yet take into account our solution which is to return a 409 for one of the updates (in the case of a conflict). The updated test will retry on a tight loop, ensuring that we can continue to make progress in the face of contentious PUT requests to the same resource. Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
* lock in to fhir-examples 4.8.2 Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com> * Update to limit releases of fhir-examples Signed-off-by: Paul Bastide <pbastide@us.ibm.com> Co-authored-by: Paul Bastide <pbastide@us.ibm.com>
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
Issue #2086 - Change default bulkdata directory
…der/impl/S3Provider.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com> Co-authored-by: Lee Surprenant <lmsurpre@us.ibm.com>
…der/impl/S3Provider.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
…der/impl/S3Provider.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
…der/impl/S3Provider.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
issue 2283 - eliminate redundant reads during ingestion
…ientTestBase.java Signed-off-by: Paul Bastide <pbastide@us.ibm.com> Co-authored-by: Troy Biesterfeld <60481063+tbieste@users.noreply.github.com>
FHIRClient.getWebTarget(String baseURL) throws NPE #2450
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
Issue #2445 - Log warning messages about deprecated tables
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
issue #2461 - upgrade to liberty 21.0.0.5
…st (#2464) * Issue #2462 - updated Institutional EOB constraints and added unit test Signed-off-by: John T.E. Timm <johntimm@us.ibm.com> * Issue #2462 - updated CHANGELOG.md Signed-off-by: John T.E. Timm <johntimm@us.ibm.com> * Issue #2462 - updated CHANGELOG.md Signed-off-by: John T.E. Timm <johntimm@us.ibm.com> * Issue #2462 - more updates Signed-off-by: John T.E. Timm <johntimm@us.ibm.com>
Signed-off-by: Paul Bastide <pbastide@us.ibm.com>
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
* #2421 - Add terminology clear-cache operations The terminology subsystem caches terminology resources by URL and/or URL + version. If the user tries to update a CodeSystem or ValueSet resource keeping the same URL + version, the cache does not get cleared and some operations (e.g. validate-code) do not return the expected results after update. This change adds an operation ($clear-cache) that can be called on either terminology resource and will clear the appropriate caches. Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Address test failure due to unexpected test interactions. Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Fix issue with operation ordering on clean database All my testing has been done on a dirty database. There are automated build failures that appear to be related to test order and a resource not existing yet on a clean database. Flipping the order of the resource puts and initial clear cache operations so that the resource is guaranteed to be in place. Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Address code format issues Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Split term cache operations into a separate module Per discussion with the team, the cache operations are being split into a separate module that will not be included in the default server build. Since it isn't automatically included, the build automation scripts needed to be updated. Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Update POM version for new module Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Fix Windows integration, update README Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Apply suggested change Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> * Apply suggested change Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> Co-authored-by: Lee Surprenant <lmsurpre@us.ibm.com> * change package name from javax.json to jakarta.json Signed-off-by: Corey Sanders <corey.thecolonel@gmail.com> Co-authored-by: Lee Surprenant <lmsurpre@us.ibm.com>
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
add file-based bulkdata config to the docker-compose env
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
sudo build and release
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
Signed-off-by: Lee Surprenant <lmsurpre@us.ibm.com>
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
tbieste
force-pushed
the
tbieste-issue-2195
branch
from
e4df5da to
a8372cc
Compare
tbieste
force-pushed
the
tbieste-issue-2195
branch
from
a8372cc to
4209d5d
Compare
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
tbieste
force-pushed
the
tbieste-issue-2195
branch
from
4209d5d to
b022ddb
Compare
Signed-off-by: Troy Biesterfeld <tbieste@us.ibm.com>
tbieste
force-pushed
the
tbieste-issue-2195
branch
from
20b95ca to
ae42233
Compare
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Issue #2195 - Add logicalResourceIds param to $reindex operation
Signed-off-by: Troy Biesterfeld tbieste@us.ibm.com