Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Beta build, 6/5, version diffs #12

Merged
merged 86 commits into from
Jun 5, 2014
Merged

Beta build, 6/5, version diffs #12

merged 86 commits into from
Jun 5, 2014

Commits on May 21, 2014

  1. SWORD: rather than creator, check for Permission.DestructiveEdit #3385 

    - seems similar to "admin" in DVN 3.x
- random users will never have this permission in the root, though
    @pdurbin
    pdurbin committed May 21, 2014
    Configuration menu
    Copy the full SHA
    cd139dc View commit details
    Browse the repository at this point in the history

  2. Adding datasets and datasets via API - DONE.

    @michbarsinai
    michbarsinai committed May 21, 2014
    Configuration menu
    Copy the full SHA
    521d6ad View commit details
    Browse the repository at this point in the history

  3. no more manual dataset creation! use JSON thanks to Michael!

    @pdurbin
    pdurbin committed May 21, 2014
    Configuration menu
    Copy the full SHA
    9a50a4a View commit details
    Browse the repository at this point in the history

  4. Dataset version API endpoint now specifies x.y versioning, NOT the ve… 

    …rsion numeric field
    @michbarsinai
    michbarsinai committed May 21, 2014
    Configuration menu
    Copy the full SHA
    e604e46 View commit details
    Browse the repository at this point in the history

  5. Can now delete a permission from a role (closes #4012)

    @michbarsinai
    michbarsinai committed May 21, 2014
    Configuration menu
    Copy the full SHA
    2dbe883 View commit details
    Browse the repository at this point in the history

  6. Add Version difference functionality 

    notes to display general differences. pop-up for details of adjacent
versions.  Allow for selection when 3 or more versions
    @sekmiller
    sekmiller committed May 21, 2014
    Configuration menu
    Copy the full SHA
    725fe65 View commit details
    Browse the repository at this point in the history

Commits on May 22, 2014

  1. Fix display issue - also added isEmpty check to added data check 

    Start to add “By metadata block”
    @sekmiller
    sekmiller committed May 22, 2014
    Configuration menu
    Copy the full SHA
    2dd2b35 View commit details
    Browse the repository at this point in the history

  2. Fix Compare Primitive and check empty for deleted data

    @sekmiller
    sekmiller committed May 22, 2014
    Configuration menu
    Copy the full SHA
    47430b2 View commit details
    Browse the repository at this point in the history

  3. Start of Differences by Metadata Block 

    Preliminary - click “show details” link to get changes by metadata block
Use the select version “Show Differences” to get prior difference popup
    @sekmiller
    sekmiller committed May 22, 2014
    Configuration menu
    Copy the full SHA
    c99cf80 View commit details
    Browse the repository at this point in the history

  4. Add File Info to Differences by Block Pop up 

    Simplify Adding to Summary Lists
    @sekmiller
    sekmiller committed May 22, 2014
    Configuration menu
    Copy the full SHA
    2a8a116 View commit details
    Browse the repository at this point in the history

  5. Add Added and Deleted Data to the By Block Popup

    @sekmiller
    sekmiller committed May 22, 2014
    Configuration menu
    Copy the full SHA
    976ccf9 View commit details
    Browse the repository at this point in the history

  6. Merge origin/master

    @mheppler
    mheppler committed May 22, 2014
    Configuration menu
    Copy the full SHA
    6e0e705 View commit details
    Browse the repository at this point in the history

  7. Moved file ingest logic from the dataset page and into ingestService.

    @landreev
    landreev committed May 22, 2014
    Configuration menu
    Copy the full SHA
    678d323 View commit details
    Browse the repository at this point in the history

  8. More functionality moved from DatasetPage and into the Ingest Service.

    @landreev
    landreev committed May 22, 2014
    Configuration menu
    Copy the full SHA
    5d42569 View commit details
    Browse the repository at this point in the history

  9. cosmetic: removed some dead, commented-out code from datasetpage.

    @landreev
    landreev committed May 22, 2014
    Configuration menu
    Copy the full SHA
    f812ffd View commit details
    Browse the repository at this point in the history

  10. progress on SWORD file upload (look in zip, get filename, etc.) #3385

    @pdurbin
    pdurbin committed May 22, 2014
    Configuration menu
    Copy the full SHA
    d606492 View commit details
    Browse the repository at this point in the history

Commits on May 23, 2014

  1. Merge origin/master

    @mheppler
    mheppler committed May 23, 2014
    Configuration menu
    Copy the full SHA
    d075c1d View commit details
    Browse the repository at this point in the history

  2. upload trees.png in test via SWORD. APIs FTW! 

    - also, create the dataverse.files.directory if need be
    @pdurbin
    pdurbin committed May 23, 2014
    Configuration menu
    Copy the full SHA
    426b5a6 View commit details
    Browse the repository at this point in the history

  3. Updated the website to link to http://datascience.iq.harvard.edu/

    posixeleni committed May 23, 2014
    Configuration menu
    Copy the full SHA
    c5d7693 View commit details
    Browse the repository at this point in the history

  4. SWORD: ensure multifile zips work, error on bad zips #3385

    @pdurbin
    pdurbin committed May 23, 2014
    Configuration menu
    Copy the full SHA
    6ecf17c View commit details
    Browse the repository at this point in the history

  5. Updated .js on the dataverse.xhtml page to fix bug #3935. The breadcr… 

    …umb tree doesn't open 2nd levels after Edit Dataset -> Cancel
    @raprasad
    raprasad committed May 23, 2014
    Configuration menu
    Copy the full SHA
    7cfdb98 View commit details
    Browse the repository at this point in the history

  6. Merge branch 'master' of github.com:IQSS/dataverse

    @raprasad
    raprasad committed May 23, 2014
    Configuration menu
    Copy the full SHA
    7b20c0d View commit details
    Browse the repository at this point in the history

  7. Removed commented out alert from .js file

    @raprasad
    raprasad committed May 23, 2014
    Configuration menu
    Copy the full SHA
    cd0c449 View commit details
    Browse the repository at this point in the history

  8. Changed <image tag to <img tag for bug #4030

    @raprasad
    raprasad committed May 23, 2014
    Configuration menu
    Copy the full SHA
    3b36d31 View commit details
    Browse the repository at this point in the history

  9. start using new ingestService.createDataFile method #3385 

    - files indexed properly now
- removed lots of boilerplate code
- no need to create temp directories, etc. just use the inputstream!
    @pdurbin
    pdurbin committed May 23, 2014
    Configuration menu
    Copy the full SHA
    823f0ff View commit details
    Browse the repository at this point in the history

Commits on May 27, 2014

  1. cause.getMessage() was null for homemade.zip, added check

    @pdurbin
    pdurbin committed May 27, 2014
    Configuration menu
    Copy the full SHA
    517b4ff View commit details
    Browse the repository at this point in the history

  2. Merge origin/master

    @mheppler
    mheppler committed May 27, 2014
    Configuration menu
    Copy the full SHA
    03eeef0 View commit details
    Browse the repository at this point in the history

  3. more work on deleting datasets via SWORD #3385

    @pdurbin
    pdurbin committed May 27, 2014
    Configuration menu
    Copy the full SHA
    7d6fef0 View commit details
    Browse the repository at this point in the history

  4. Merge origin/master

    @mheppler
    mheppler committed May 27, 2014
    Configuration menu
    Copy the full SHA
    b01035d View commit details
    Browse the repository at this point in the history

  5. enable publishing of datasets via SWORD #3385

    @pdurbin
    pdurbin committed May 27, 2014
    Configuration menu
    Copy the full SHA
    8d9d62b View commit details
    Browse the repository at this point in the history

  6. Committing progress on cleaning up the UI for Roles + Permissions. Mo… 

    …ved the entire Roles tab into a collapsable panel under Users. Added a static placeholder for Invite Users/Create Groups.
    @mheppler
    mheppler committed May 27, 2014
    Configuration menu
    Copy the full SHA
    009c253 View commit details
    Browse the repository at this point in the history

  7. Merge origin/master

    @mheppler
    mheppler committed May 27, 2014
    Configuration menu
    Copy the full SHA
    84ab3d6 View commit details
    Browse the repository at this point in the history

Commits on May 28, 2014

  1. Modified ingest of metadata extracted from (fits) files, to properly … 

    …handle

compound fields.
    @landreev
    landreev committed May 28, 2014
    Configuration menu
    Copy the full SHA
    92df151 View commit details
    Browse the repository at this point in the history

  2. enforce auth and other SWORD cleanup #3385

    @pdurbin
    pdurbin committed May 28, 2014
    Configuration menu
    Copy the full SHA
    d213de8 View commit details
    Browse the repository at this point in the history

  3. SWORD cleanup of filename handling #3385

    @pdurbin
    pdurbin committed May 28, 2014
    Configuration menu
    Copy the full SHA
    8a0aea3 View commit details
    Browse the repository at this point in the history

  4. Added a real uniqueness check on compound fields, comparing compound … 

    …values as

sets of child values -- all must match for the 2 compounds to be declared
"equal". In real life application - when comparing 2 date ranges, both ends
must match.
    @landreev
    landreev committed May 28, 2014
    Configuration menu
    Copy the full SHA
    2975f21 View commit details
    Browse the repository at this point in the history

  5. SWORD cleanup (especially globalId handling) #3385

    @pdurbin
    pdurbin committed May 28, 2014
    Configuration menu
    Copy the full SHA
    7088103 View commit details
    Browse the repository at this point in the history

  6. Changed the sizing of PDF thumbnails, to match the resizing rules 

    used for other image files.
    @landreev
    landreev committed May 28, 2014
    Configuration menu
    Copy the full SHA
    b65b5a9 View commit details
    Browse the repository at this point in the history

  7. Merge branch 'master' of github.com:IQSS/dataverse_temp

    @landreev
    landreev committed May 28, 2014
    Configuration menu
    Copy the full SHA
    d542da8 View commit details
    Browse the repository at this point in the history

Commits on May 29, 2014

  1. Cleaned up the spacing and wrapping issues for selected facets that a… 

    …re displayed above the results table on the dataverse pg.
    @mheppler
    mheppler committed May 29, 2014
    Configuration menu
    Copy the full SHA
    a0af16d View commit details
    Browse the repository at this point in the history

  2. allow file deletion via SWORD #3385

    @pdurbin
    pdurbin committed May 29, 2014
    Configuration menu
    Copy the full SHA
    551b936 View commit details
    Browse the repository at this point in the history

  3. Adding some subsetting optimization code I've been working on.

    @landreev
    landreev committed May 29, 2014
    Configuration menu
    Copy the full SHA
    998c636 View commit details
    Browse the repository at this point in the history

Commits on May 30, 2014

  1. No extra html tags in the header (closes #3903)

    @michbarsinai
    michbarsinai committed May 30, 2014
    Configuration menu
    Copy the full SHA
    489be9e View commit details
    Browse the repository at this point in the history

  2. AbstractVoidCommand can no get any DvObject (not jsut Dataverse). Closes 

     #4057
    @michbarsinai
    michbarsinai committed May 30, 2014
    Configuration menu
    Copy the full SHA
    0d140d2 View commit details
    Browse the repository at this point in the history

  3. Removed "Setup" from the Edit Dataverse dropdown menu and moved the S… 

    …elect Facet form to the General Information form.
    @mheppler
    mheppler committed May 30, 2014
    Configuration menu
    Copy the full SHA
    35988af View commit details
    Browse the repository at this point in the history

  4. Revise the version differences notes 

    Add bolding.  Process the note in the page.
    @sekmiller
    sekmiller committed May 30, 2014
    Configuration menu
    Copy the full SHA
    44acc14 View commit details
    Browse the repository at this point in the history

  5. fix build. DeleteDataFileCommand changed in 0d140d2

    @pdurbin
    pdurbin committed May 30, 2014
    Configuration menu
    Copy the full SHA
    8f070f4 View commit details
    Browse the repository at this point in the history

  6. Fix format issue for commas 

    Also get counts for compound fields
    @sekmiller
    sekmiller committed May 30, 2014
    Configuration menu
    Copy the full SHA
    797123d View commit details
    Browse the repository at this point in the history

  7. Ticket #4033: Moved the 'inherit assignments' checkbox to the top

    @michbarsinai
    michbarsinai committed May 30, 2014
    Configuration menu
    Copy the full SHA
    5970789 View commit details
    Browse the repository at this point in the history

  8. Merge branch 'master' of github.com:IQSS/dataverse

    @michbarsinai
    michbarsinai committed May 30, 2014
    Configuration menu
    Copy the full SHA
    e43f5f2 View commit details
    Browse the repository at this point in the history

  9. move publish dataverse rules from front to back end #3225 

    - can now publish dataverses via SWORD but should it be moved to the
  native API?
- also curl examples no longer require zero-length-file.txt #3332
    @pdurbin
    pdurbin committed May 30, 2014
    Configuration menu
    Copy the full SHA
    b0d6d4c View commit details
    Browse the repository at this point in the history

Commits on Jun 2, 2014

  1. manage-roles page working with the new setup

    @michbarsinai
    michbarsinai committed Jun 2, 2014
    Configuration menu
    Copy the full SHA
    3ec905f View commit details
    Browse the repository at this point in the history

  2. API now deals properly with updating of the DRAFT versions of datasets ( 

    closes #4034)
    @michbarsinai
    michbarsinai committed Jun 2, 2014
    Configuration menu
    Copy the full SHA
    c22507e View commit details
    Browse the repository at this point in the history

  3. DeleteDatasetCommand now triggers indexing (closes #4040)

    @michbarsinai
    michbarsinai committed Jun 2, 2014
    Configuration menu
    Copy the full SHA
    1b4163e View commit details
    Browse the repository at this point in the history

  4. Cleaned up the UI of the version differences popup. Added some static… 

    … placeholders that will need to be wired up to pull dynamic info.
    @mheppler
    mheppler committed Jun 2, 2014
    Configuration menu
    Copy the full SHA
    7ef9761 View commit details
    Browse the repository at this point in the history

  5. API change - PUT is used to create or update the DRAFT version of a d… 

    …ataset
    @michbarsinai
    michbarsinai committed Jun 2, 2014
    Configuration menu
    Copy the full SHA
    2367ff5 View commit details
    Browse the repository at this point in the history

  6. Merge origin/master

    @mheppler
    mheppler committed Jun 2, 2014
    Configuration menu
    Copy the full SHA
    80cd546 View commit details
    Browse the repository at this point in the history

Commits on Jun 3, 2014

  1. post-beta (beta 2?) FITS parsing plugin patch. 

    Adds more elaborate logic for handling start- and stop-observation times, exposures, spatial coordinates, etc.
Fixes ingest failures on files with missing NAXES, and more.
    @landreev
    landreev committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    4b9944e View commit details
    Browse the repository at this point in the history

  2. one last cosmetic fix... no need to adjust the end time, if no exposu… 

    …re time is provided.
    @landreev
    landreev committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    3753ce4 View commit details
    Browse the repository at this point in the history

  3. one more last fix to the fits plugin...

    @landreev
    landreev committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    6af8b19 View commit details
    Browse the repository at this point in the history

  4. purely cosmetic - rearranged some commented-out and documented code l… 

    …ines.
    @landreev
    landreev committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    76ec05f View commit details
    Browse the repository at this point in the history

  5. Added an API call to release a dataset

    @michbarsinai
    michbarsinai committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    62bbe85 View commit details
    Browse the repository at this point in the history

  6. Terminology clean-up: 'release' ---> 'publish'

    @michbarsinai
    michbarsinai committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    c019da4 View commit details
    Browse the repository at this point in the history

  7. Some internal optimizations for subsetting; used in the summary stati… 

    …stics calculations.
    @landreev
    landreev committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    81e1c3a View commit details
    Browse the repository at this point in the history

  8. changed call from ReleaseDatasetCommand to PublishDatasetCommand

    @scolapasta
    scolapasta committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    1794e43 View commit details
    Browse the repository at this point in the history

  9. changed call from ReleaseDataverseCommand to PublishDataverseCommand

    @scolapasta
    scolapasta committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    03e0e92 View commit details
    Browse the repository at this point in the history

  10. Minor cleanup to get the roles + permissions page a little more organ… 

    …ized and presentable for the next beta release.
    @mheppler
    mheppler committed Jun 3, 2014
    Configuration menu
    Copy the full SHA
    994985b View commit details
    Browse the repository at this point in the history

Commits on Jun 4, 2014

  1. Vagrant working again, documented, tests added

    @pdurbin
    pdurbin committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    8f398d3 View commit details
    Browse the repository at this point in the history

  2. Added API to publish a dataverse. This closes #4035

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    b07cc01 View commit details
    Browse the repository at this point in the history

  3. build war inside Vagrant VM if need be

    @pdurbin
    pdurbin committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    7103752 View commit details
    Browse the repository at this point in the history

  4. Get 3.x file differences 

    and other changes to popup
    @sekmiller
    sekmiller committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    403b14f View commit details
    Browse the repository at this point in the history

  5. converting API beans to return proper responses (#3712)

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    fbc1a22 View commit details
    Browse the repository at this point in the history

  6. Merge branch 'master' of github.com:IQSS/dataverse

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    9fba117 View commit details
    Browse the repository at this point in the history

  7. Changed summary note from Data File to File

    @sekmiller
    sekmiller committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    9a01c5b View commit details
    Browse the repository at this point in the history

  8. More work on converting API responses (#3712)

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    8b866f4 View commit details
    Browse the repository at this point in the history

  9. Merge branch 'master' of github.com:IQSS/dataverse

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    4a463fa View commit details
    Browse the repository at this point in the history

  10. a couple of last minute fits fixes.

    @landreev
    landreev committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    d13f572 View commit details
    Browse the repository at this point in the history

  11. Another change to the date formatting.

    @landreev
    landreev committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    bb2420c View commit details
    Browse the repository at this point in the history

  12. More API response code work (#3712)

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    4373299 View commit details
    Browse the repository at this point in the history

  13. Merge branch 'master' of github.com:IQSS/dataverse

    @michbarsinai
    michbarsinai committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    1fa864d View commit details
    Browse the repository at this point in the history

  14. Order changed fields by display order for Ver Diff Pop-up 

    also fix count for compound fields (added, changed)
    @sekmiller
    sekmiller committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    329b9f3 View commit details
    Browse the repository at this point in the history

  15. progress on fronting glassfish with apache #1096 #2657

    @pdurbin
    pdurbin committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    71cd4ef View commit details
    Browse the repository at this point in the history

  16. Cleaned up multiple UI issues for the version differences dialog popup.

    @mheppler
    mheppler committed Jun 4, 2014
    Configuration menu
    Copy the full SHA
    36b7dad View commit details
    Browse the repository at this point in the history

Commits on Jun 5, 2014

  1. Fix File Differences when there are no changes 

    Repress nulls in compound val display and remove unused code
    @sekmiller
    sekmiller committed Jun 5, 2014
    Configuration menu
    Copy the full SHA
    6d8d630 View commit details
    Browse the repository at this point in the history

  2. Fix issue of going from "0" to "1" compound field 

    Bonus: add last updatetime stamp to dataset versions on commands
    @sekmiller
    sekmiller committed Jun 5, 2014
    Configuration menu
    Copy the full SHA
    e648bd0 View commit details
    Browse the repository at this point in the history

  3. Updated documentation

    @michbarsinai
    michbarsinai committed Jun 5, 2014
    Configuration menu
    Copy the full SHA
    c52d4c1 View commit details
    Browse the repository at this point in the history