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Add support for recursive consent withdrawn updates for ONT #172

Merged
merged 3 commits into from
Jul 17, 2023
Merged

Add support for recursive consent withdrawn updates for ONT #172

merged 3 commits into from
Jul 17, 2023

Commits on Jul 13, 2023

  1. Add support for recursive consent withdrawn updates for ONT 

    Add recurse keyword and recursive behaviour for collections to:

has_consent_withdrawn
has_consent_withdrawn_metadata
has_consent_withdrawn_permissions
ensure_consent_withdrawn

Add an is_minknow_report function to help in managing permissions.

Rename ont.update_metadata to ont.apply_metadata to distinguish it
from the secondary metadata update process.

Change do_*_update function names to update_* because they read better.
    @kjsanger
    kjsanger committed Jul 13, 2023
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Commits on Jul 17, 2023

  1. Update src/npg_irods/metadata/lims.py 

    Co-authored-by: mksanger <73285932+mksanger@users.noreply.github.com>
    @kjsanger @mksanger
    kjsanger and mksanger authored Jul 17, 2023
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  2. Document possible exception for the recurse keyword

    @kjsanger
    kjsanger committed Jul 17, 2023
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