Automatic Integration for Neural Spatio-Temporal Point Process models (AI-STPP) is a new paradigm for exact, efficient, non-parametric inference of point process. It is capable of learning complicated underlying intensity functions, like a damped sine wave.

My chapter summaries, example solutions, and implementation for the fantastic book "Pattern recognition and machine learning" by Christopher Bishop.

Spatial and temporal epidemiology data mining flow tools including data processing and analysis, model setup and simulation, inference and evaluation. Focusing on state-of-the-art methods such as universal differential equations, epidemiology-informed deep learning methods.

Bridging System dynamics tool (Vensim) and Bayesian computation tool (Stan)

This repository contains code for paper: "Are you sure it’s an artifact? Artifact detection and uncertainty quantification in histological images."

Linear models, Bayesian multivariate statistics, probabilistic machine leanring.

Framework for learning effective reduced order dynamics of molecular systems.

We use probabilistic programming (PyMC3) to roughly estimate 'R_0' and 'lambda_0' directly from pandemic infection data.