kishwarshafin / pepper Star 244 Code Issues Pull requests PEPPER-Margin-DeepVariant nanopore variants variant-calling oxford-nanopore genome-variation long-reads pacbio-ccs assembly-polishing Updated Jan 12, 2024 Python
Redmar-van-den-Berg / HiFi-assembly Star 2 Code Issues Pull requests Assemble HiFi reads and identify genes of interest bioinformatics pacbio-ccs Updated Feb 1, 2022 Python
guigolab / pb_gen Star 1 Code Issues Pull requests Process PacBio Sequel and Sequel II subread BAMs into CCS FASTQ files sequence-analysis sequencing-rna pacbio-iso-seq-pipeline-wrapper pacbio-iso-seq pacbio-ccs Updated Sep 15, 2021 Python