TreeBeST: Tree Building guided by Species Tree (Ensembl Compara modifications)

Phylogeographic workflow using sliding-windows, RAxML-NG and FastTree

Rapid Neighbor-Joining phylogenetic tree creation method implementation for Node.js

GPU accllerated program for Neighbor-Joining algorithm of Biopython library with PyCUDA

Nei-Saitou neighbor-joining algorithm for phylogeny construction/inference. Neighbor joining is a bottom-up (agglomerative) clustering method for the creation of phylogenetic/evolutionary trees.

For Species Tree estimation using similarity matrix, distance matrix and NJ (FastME)

Python tool for relative mutation rate of different genes across viral strains.

Web App for constructing phylogenetic trees using various clustering methods and algorithms.