Efficiently keep track of changes to genomes

Assign taxonomy with blast, can be used for qiime

Mining NCBI BLAST output

A Python3 script to quickly spot check 10 random sequences from a BAM/FASTx file.

Just a simple program for predicting virus hosts.

divide blast query and run all chunks across HPC or localhost in parallelly

Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.

Automating NCBI BLAST requests from FASTQ/FASTA/GENBANK files to format into a readable file, graph representation and more!

Targeted Probe Design Pipeline. Using mWGS genome bin clusters, prokka annotation predictions, and blast+ databases for generation, processing and filtering probe sequences.

Parse binary files from NCBI blast or Cblaster into more useful information (tree, table and pie chart)

Python and R Scripts for Statistical analysis of available immunogobulin variable genes

Does multiple nucleotidic | aminoacidic BLAST queries in the NCBI BLAST web from a given multiFASTA and writes the output with the results. The queries are parallelized using Threads.

Small project to use NCBI and RDP websites for Sequence alignments using Selenium for Python

This tiny piece of program helps you transferring NCBI Blast result to spreadsheet. You just need to download the Blast result in a single JSON file.