A performant, powerful query framework to search for network motifs
MetaLogo: a heterogeneity-aware sequence logo generator and aligner
DYnamic MOtif-NoDes (DYMOND) is a dynamic network generative model based on temporal motifs and node behavior.
Local Motif Clustering on Time-Evolving Graphs, KDD 2020
Python (3.8+) implementation of structural similarity and complementarity coefficients for undirected (un)weighted networks based on efficient counting of 2- and 3-paths (triples and quadruples) and 3- and 4-cycles (triangles and quadrangles).
This repository contains datasets and codes for the paper Hypergraph Motifs Representation Learning. Alessia Antelmi, Gennaro Cordasco, Daniele De Vinco, Valerio Di Pasquale, Mirko Polato, Carmine Spagnuolo, KDD 2025
DYnamic Attributed Node rolEs (DYANE) is an attributed dynamic-network generative model based on temporal motifs and attributed node behavior.
An object-oriented Python library for simulating biological sequences
An in vivo PRA reveals intronic motifs that combinatorially regulate splicing in a tissue-biased manner.
Repositório para apresentação de código desenvolvido pelo grupo 2 para a UC Algoritmos Avançados para a Bioinformática do Mestrado em Bioinformática, ano lectivo 23-24.
Loop detector on triplet formatted data
Resolução proposta por Duarte Velho (PG53481) do teste realizado em Época Especial (23/24), da UC Algoritmos para Análise de Sequências Biológicas, providenciado pelo Professor Rui Mendes.
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