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Accurate Typing of Diverse Immune-Related Gene Families from Long-Read Sequencing Data. It can handle HLA, KIR, IG, TCR, CYP gene families. It supports both WGS and amplicon data. It supports PacBio and Nanopore data.
This repository provides code and data to generate data release files for the Human Immunology Project Consortium (HIPC) Dashboard (http://hipc-dashboard.org/), a web resource for human immune signatures.
The main focus of this study is a comprehensive comparison between immune cell deconvolution signatures generated by xCell and Cibersort and corresponding flow cytometry data.