pyJASPAR: A Pythonic interface to JASPAR transcription factor motifs
Co-accessibility network from single-cell ATAC-seq data. Python code, based on Cicero package (R).
Code and data used to create the JASPAR UCSC Genome Browser tracks data hub
Code and data used by the JASPAR profile inference tool
A powerful abstraction of gene databases
Depicting pseudotime-lagged causality for accurate gene-regulatory inference
An integrative toolkit for detecting cell type-specific regulators
Analysis and retrieval of Regulatory EleMents (REMs) linked to genes
Predict small molecule-mediated regulatory effects on miRNA expression
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