✏️ A versatile DNA sequence optimizer
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Updated
Aug 29, 2024 - Python
✏️ A versatile DNA sequence optimizer
CodonTransformer: The ultimate tool for codon optimization, optimizing DNA sequences for heterologous protein expression across 164 species.
RNN-based Codon Optimization Tool. Publication: https://doi.org/10.1186/s12859-023-05246-8
📊 Codon usage tables in code-friendly format + Python bindings
Simple Python program to perform codon optimization or heterology calculations.
Codonopt program is designed for codon optimization of protein sequences. The core of it based on the mathematical codon optimization proposed by Şen et al. (2020)
Phage library sequence generator with degenerate basepairs.
It is simple codon optimiser by using codon bias and usage
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