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8 public repositories
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Encoder-Decoder Cell and Nuclei segmentation models
Updated
Jul 5, 2024
Python
Large-scale cell segmentation with cellpose.
Updated
Oct 22, 2024
Python
Graphical tool for creating image segmentation annotations and training custom Cellpose models
Updated
May 6, 2024
Python
Wrapper code for segmentation of cells and nuclei with Cellpose.
Updated
Jul 19, 2023
Python
Python Instance (map) Eikonal Function Solver
Updated
Aug 2, 2023
Python
A snakemake pipeline to perform cell segmentation on MERFISH spatial transcriptomics data.
Updated
Nov 22, 2023
Python
a wrapper for cellpose: contains spagetti
Updated
Feb 3, 2024
Python
Mammary cell shape computation over time with Trackmate-Cellpose
Updated
Dec 17, 2024
Python
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