Apptainer in Docker!
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Updated
Nov 29, 2024 - Dockerfile
Apptainer in Docker!
A collection of Dockerfiles and Singularity definition files used to build the containers that are used on the Roar cluster!
Build Docker container for HISAT2 and (optionally) convert to Apptainer/Singularity.
Build Docker container for BBTools and (optionally) convert to Apptainer/Singularity.
Build Docker container for HTSeq and (optionally) convert to Apptainer/Singularity
Build Docker container for FASTX Toolkit and (optionally) convert to Apptainer/Singularity.
Build Docker container for Subread package and (optionally) convert to Apptainer/Singularity.
Build Docker container for FastQC software and (optionally) convert to Apptainer/Singularity.
Build Docker container for BWA and (optionally) convert to Apptainer/Singularity.
Build Docker container for FastQ Screen software and (optionally) convert to Apptainer/Singularity.
Build Docker container for Bowtie 2 and (optionally) convert to Apptainer/Singularity.
Docker and Singularity definition files for CSDMS software
Keeps track of all docker images I have created for our pipelines
Build Docker container for Picard Tools and (optionally) convert to Apptainer/Singularity.
Build Docker container for RseQC and (optionally) convert to Apptainer/Singularity.
Build Docker container for MultiQC and (optionally) convert to Apptainer/Singularity.
Build Docker container for ea-utils and (optionally) convert to Apptainer/Singularity.
Build Docker container for Apptainer/Singularity software
Add a description, image, and links to the apptainer topic page so that developers can more easily learn about it.
To associate your repository with the apptainer topic, visit your repo's landing page and select "manage topics."