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MRG: Fix rs214 LCA databases in databases.md #2690

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merged 1 commit into from
Jul 26, 2023

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hyphaltip
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@hyphaltip hyphaltip commented Jul 25, 2023

The rs214 links are broken for the LCA files, small fix to point to the correct URL folder; the URLs for the rs214 LCA DBs did not get updated in the update of the table for those links.

Currently the DBs in the LCA column of the table are 404ed.
https://sourmash.readthedocs.io/en/latest/databases.html#gtdb-r08-rs214-genomic-representatives-85k

Once the items above are done, and all checks pass, request a review!

The rs214 links are broken for the LCA files, small fix to point to the correct URL folder
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codecov bot commented Jul 25, 2023

Codecov Report

Merging #2690 (9bbc302) into latest (351a8c9) will increase coverage by 7.56%.
The diff coverage is n/a.

@@            Coverage Diff             @@
##           latest    #2690      +/-   ##
==========================================
+ Coverage   85.26%   92.83%   +7.56%     
==========================================
  Files         133      104      -29     
  Lines       15179    12389    -2790     
  Branches     2612     2612              
==========================================
- Hits        12942    11501    -1441     
+ Misses       1936      587    -1349     
  Partials      301      301              
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@ctb ctb changed the title Update databases.md MRG: Fix rs214 LCA databases in databases.md Jul 26, 2023
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thank you!

@ctb ctb merged commit 7351eb4 into sourmash-bio:latest Jul 26, 2023
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ctb commented Jul 26, 2023

thanks jason!

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3 participants