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Scripts to be used as a bioinformatician, currently in microbiology field.

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Name		Name	Last commit message	Last commit date
Latest commit History 94 Commits
.vscode		.vscode
process_phmmer_result		process_phmmer_result
pyBioinfo_modules		pyBioinfo_modules
tests		tests
.gitignore		.gitignore
antismash_get_TE_of_NRPS.py		antismash_get_TE_of_NRPS.py
bam_files_calculate_coverage.py		bam_files_calculate_coverage.py
bioSeq_add_GFF_to_Sequence.py		bioSeq_add_GFF_to_Sequence.py
bioSeq_compare_proteomes.py		bioSeq_compare_proteomes.py
bioSeq_extract_CDS_from_gbk.py		bioSeq_extract_CDS_from_gbk.py
bioSeq_extract_proteins_from_gbk.py		bioSeq_extract_proteins_from_gbk.py
bioSeq_new_LOCUS_TAG.py		bioSeq_new_LOCUS_TAG.py
bioSeq_remove_duplicate_sequences.py		bioSeq_remove_duplicate_sequences.py
chipSeq_align_to_genome.py		chipSeq_align_to_genome.py
chipSeq_macs_peak_calling.py		chipSeq_macs_peak_calling.py
chipSeq_plot_pileup_comparisons.py		chipSeq_plot_pileup_comparisons.py
chipSeq_processSam2Bam.py		chipSeq_processSam2Bam.py
chipSeq_pull_peak_sequences.py		chipSeq_pull_peak_sequences.py
cluster_BGCs_mash_bigscape.py		cluster_BGCs_mash_bigscape.py
consensus_sequence_generator.py		consensus_sequence_generator.py
gather_antismash_results.py		gather_antismash_results.py
howto_RNA-Seq.md		howto_RNA-Seq.md
plot_contig_length_distribution.py		plot_contig_length_distribution.py
proteomics_split_MaxQuant_results.py		proteomics_split_MaxQuant_results.py
readme.md		readme.md
rnaSeq_Align_bowtie2.py		rnaSeq_Align_bowtie2.py
rnaSeq_featureCounts.py		rnaSeq_featureCounts.py
rnaSeq_raw_to_counts.py		rnaSeq_raw_to_counts.py
run_antismash.py		run_antismash.py
run_prokka.py		run_prokka.py