-
Notifications
You must be signed in to change notification settings - Fork 32
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Use vcf2zarr in GWAS tutorial notebook #1258
Conversation
c3ffc22
to
5c2f2a4
Compare
The docs build works for me locally - with the exact same set of Python package versions - but on CI it's failing with
and
|
Build docs with Python 3.10 Use %%bash for running vcf2zarr
21dc8ee
to
7094d3c
Compare
There was a problem hiding this comment.
Choose a reason for hiding this comment
The reason will be displayed to describe this comment to others. Learn more.
Happy to merge when you are - I haven't viewed the notebook though (github's not making it easy to look at the rendered output)
Thanks @jeromekelleher. Here's the new notebook (updates in the "Importing data from VCF" section): I'll merge it later today. |
LGTM - short and sweet! |
changelog.rst