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Update GWAS tutorial to use vcf2zarr #1257

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tomwhite opened this issue Sep 11, 2024 · 0 comments · Fixed by #1258
Closed

Update GWAS tutorial to use vcf2zarr #1257

tomwhite opened this issue Sep 11, 2024 · 0 comments · Fixed by #1258
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documentation Improvements or additions to documentation IO Issues related to reading and writing common third-party file formats

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@tomwhite
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We have deprecated the VCF reading functions (#1232), so we should change the tutorial to use vcf2zarr.
@tomwhite tomwhite added documentation Improvements or additions to documentation IO Issues related to reading and writing common third-party file formats labels Sep 11, 2024
@tomwhite tomwhite mentioned this issue Sep 16, 2024
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Use vcf2zarr in GWAS tutorial notebook tomwhite/sgkit
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