Fix sce object conversion; #6692

satijalab · Dec 7, 2022 · 723b066 · 723b066
1 parent a4baab7
commit 723b066
Showing 1 changed file with 2 additions and 0 deletions.
diff --git a/R/objects.R b/R/objects.R
@@ -1138,6 +1138,8 @@ as.Seurat.SingleCellExperiment <- function(
         embeddings <- as.matrix(x = SingleCellExperiment::reducedDim(x = x, type = dr))
         if (is.null(x = rownames(x = embeddings))) {
           rownames(x = embeddings)  <- cell.names
+        } else {
+          rownames(x = embeddings) <- make.unique(names = rownames(x = embeddings))
         }
         if (isTRUE(x = !grepl('_$',
         gsub(pattern = "[[:digit:]]",