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Fix cluster number
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timoast committed Aug 13, 2021
1 parent acadb5d commit 03879ed
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions vignettes/multimodal_vignette.Rmd
Original file line number Diff line number Diff line change
Expand Up @@ -159,8 +159,8 @@ We can leverage our paired CITE-seq measurements to help annotate clusters deriv
VlnPlot(cbmc, "adt_CD19")
# we can also identify alternative protein and RNA markers for this cluster through differential expression
adt_markers <- FindMarkers(cbmc,ident.1 = 5, assay = 'ADT')
rna_markers <- FindMarkers(cbmc,ident.1 = 5, assay = 'RNA')
adt_markers <- FindMarkers(cbmc,ident.1 = 6, assay = 'ADT')
rna_markers <- FindMarkers(cbmc,ident.1 = 6, assay = 'RNA')
head(adt_markers)
head(rna_markers)
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