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make initial soc work with half cell models #3456
make initial soc work with half cell models #3456
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Looks good to me if tests and coverage pass
Can you run the workflows? |
Codecov ReportAll modified lines are covered by tests ✅
Additional details and impacted files@@ Coverage Diff @@
## develop #3456 +/- ##
========================================
Coverage 99.58% 99.58%
========================================
Files 256 256
Lines 20003 20048 +45
========================================
+ Hits 19920 19965 +45
Misses 83 83
☔ View full report in Codecov by Sentry. |
coverage should be at or very near 100% now |
Just read this. Adding this into the future rc1 release. |
make initial soc work with half cell models
* Bump to v23.9rc0 * Merge pull request #3412 from agriyakhetarpal/drop-i686-manylinux2014-support Drop support for i686 manylinux * Merge pull request #3413 from Saransh-cpp/improve-release-workflow Improve release workflow, add a note, bump version manually * Merge pull request #3436 from Saransh-cpp/fortnightly-wheels Build wheels on the 1st and 15th of every month * Merge pull request #3445 from pybamm-team/issue-3428-rename-exchange #3428 exchange-current density error * Merge pull request #3449 from pybamm-team/i3431-windows-wheels Fix failing windows wheel builds * Merge pull request #3456 from abillscmu/issue-3224-initial_soc make initial soc work with half cell models * Merge pull request #3467 from abillscmu/bugfix/initial_soh * Merge pull request #3423 from jsbrittain/jax_gpu JaxSolver fails when using GPU support with no input parameters * Fix changelog * Merge pull request #3475 from arjxn-py/fix-default-imports Resolve default imports for optional dependencies * Bump - `v23.9rc1` * Fix date in CHANGELOG * Bump version to v23.9 * Fix docs about Jax solver compatibility with Python versions (#3702) * Ensure correct Python versions for Jax solver compatibility * Simplify array of Python versions Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> * Use different conjunction Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> --------- Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> * Merge pull request #3706 from agriyakhetarpal/fix-pybamm-install-odes Make `pybamm_install_odes` a bit more robust * #3690 fix issue with skipped steps (#3708) * #3690 fix issue with skipped steps * #3690 changelog * #3690 add test * #3611 use actual cell volume for average total heating (#3707) * #3611 use actual cell volume for average total heating * #3611 changelog * #3611 account for number of electrode pairs * #3611 update variable names * Improve the release workflow (#3737) * Try fixing the release workflow * Turn off safety * Fix CHANGELOG * Add OS * Use regex for better matches * Update instructions, add safety checks * checkout to the version branch for the final release * Bump to v24.1rc1 * #3630 fix interpolant shape error (#3761) * #3630 fix interpolant shape error * #3630 changelog * Bump to v24.1rc2 * Bump to v24.1 * Fix doctests failures in scheduled tests (#3784) Closes #3781 * Resolve broken `scikits.odes` installation on self-hosted M-series runner (#3785) * Try fixing M-series runner tests This is being done by adding SuiteSparse and SUNDIALS installations which might have been missing on the runner, which broke `scikits.odes`. * Don't use Homebrew SUNDIALS, use LD_LIBRARY_PATH * Don't use Homebrew to install SUNDIALS * Force remove pip cache for `scikits.odes` --------- Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> * add temperature dependence to MSMR model * changelog * fix tests * fix example * rob comments * update notebook --------- Co-authored-by: Ferran Brosa Planella <Ferran.Brosa-Planella@warwick.ac.uk> Co-authored-by: Saransh Chopra <saransh0701@gmail.com> Co-authored-by: Martin Robinson <martinjrobins@gmail.com> Co-authored-by: Agriya Khetarpal <74401230+agriyakhetarpal@users.noreply.github.com> Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> Co-authored-by: Robert Timms <43040151+rtimms@users.noreply.github.com> Co-authored-by: Saransh-cpp <Saransh-cpp@users.noreply.github.com>
* Bump to v23.9rc0 * Merge pull request pybamm-team#3412 from agriyakhetarpal/drop-i686-manylinux2014-support Drop support for i686 manylinux * Merge pull request pybamm-team#3413 from Saransh-cpp/improve-release-workflow Improve release workflow, add a note, bump version manually * Merge pull request pybamm-team#3436 from Saransh-cpp/fortnightly-wheels Build wheels on the 1st and 15th of every month * Merge pull request pybamm-team#3445 from pybamm-team/issue-3428-rename-exchange pybamm-team#3428 exchange-current density error * Merge pull request pybamm-team#3449 from pybamm-team/i3431-windows-wheels Fix failing windows wheel builds * Merge pull request pybamm-team#3456 from abillscmu/issue-3224-initial_soc make initial soc work with half cell models * Merge pull request pybamm-team#3467 from abillscmu/bugfix/initial_soh * Merge pull request pybamm-team#3423 from jsbrittain/jax_gpu JaxSolver fails when using GPU support with no input parameters * Fix changelog * Merge pull request pybamm-team#3475 from arjxn-py/fix-default-imports Resolve default imports for optional dependencies * Bump - `v23.9rc1` * Fix date in CHANGELOG * Bump version to v23.9 * Fix docs about Jax solver compatibility with Python versions (pybamm-team#3702) * Ensure correct Python versions for Jax solver compatibility * Simplify array of Python versions Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> * Use different conjunction Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> --------- Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> * Merge pull request pybamm-team#3706 from agriyakhetarpal/fix-pybamm-install-odes Make `pybamm_install_odes` a bit more robust * pybamm-team#3690 fix issue with skipped steps (pybamm-team#3708) * pybamm-team#3690 fix issue with skipped steps * pybamm-team#3690 changelog * pybamm-team#3690 add test * pybamm-team#3611 use actual cell volume for average total heating (pybamm-team#3707) * pybamm-team#3611 use actual cell volume for average total heating * pybamm-team#3611 changelog * pybamm-team#3611 account for number of electrode pairs * pybamm-team#3611 update variable names * Improve the release workflow (pybamm-team#3737) * Try fixing the release workflow * Turn off safety * Fix CHANGELOG * Add OS * Use regex for better matches * Update instructions, add safety checks * checkout to the version branch for the final release * Bump to v24.1rc1 * pybamm-team#3630 fix interpolant shape error (pybamm-team#3761) * pybamm-team#3630 fix interpolant shape error * pybamm-team#3630 changelog * Bump to v24.1rc2 * Bump to v24.1 * Fix doctests failures in scheduled tests (pybamm-team#3784) Closes pybamm-team#3781 * Resolve broken `scikits.odes` installation on self-hosted M-series runner (pybamm-team#3785) * Try fixing M-series runner tests This is being done by adding SuiteSparse and SUNDIALS installations which might have been missing on the runner, which broke `scikits.odes`. * Don't use Homebrew SUNDIALS, use LD_LIBRARY_PATH * Don't use Homebrew to install SUNDIALS * Force remove pip cache for `scikits.odes` --------- Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> * add temperature dependence to MSMR model * changelog * fix tests * fix example * rob comments * update notebook --------- Co-authored-by: Ferran Brosa Planella <Ferran.Brosa-Planella@warwick.ac.uk> Co-authored-by: Saransh Chopra <saransh0701@gmail.com> Co-authored-by: Martin Robinson <martinjrobins@gmail.com> Co-authored-by: Agriya Khetarpal <74401230+agriyakhetarpal@users.noreply.github.com> Co-authored-by: Eric G. Kratz <kratman@users.noreply.github.com> Co-authored-by: Robert Timms <43040151+rtimms@users.noreply.github.com> Co-authored-by: Saransh-cpp <Saransh-cpp@users.noreply.github.com>
…_soc make initial soc work with half cell models
Description
Adds methods to use initial soc with half-cell models
Also fixes a spelling mistake I saw, lolz.
@tinosulzer it sounds like is redoing much of this anyway, so this could be considered a hot fix for now given that it may be overwritten soon.
I'd love it if this got into 23.9 as a bug fix so that I don't have to pin to some weird branch waiting for the next version, but understand if that's not possible. If I need to branch off 23.9 to make that happen, I would be happy to do so.
Fixes # (issue)
Fixes #3224
Type of change
Please add a line in the relevant section of CHANGELOG.md to document the change (include PR #) - note reverse order of PR #s. If necessary, also add to the list of breaking changes.
Key checklist:
$ pre-commit run
(or$ nox -s pre-commit
) (see CONTRIBUTING.md for how to set this up to run automatically when committing locally, in just two lines of code)$ python run-tests.py --all
(or$ nox -s tests
)$ python run-tests.py --doctest
(or$ nox -s doctests
)You can run integration tests, unit tests, and doctests together at once, using
$ python run-tests.py --quick
(or$ nox -s quick
).Further checks: