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    18 repositories

    • symptom-extraction-demo

      Public
      Jupyter Notebook
      •
      GNU General Public License v2.0
      •0•0•0•0•Updated Dec 12, 2024Dec 12, 2024

    • note_sectioning

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Nov 19, 2024Nov 19, 2024

    • clinical-regex-releases

      Public
      0•0•0•0•Updated Jun 30, 2023Jun 30, 2023

    • rpdrtools

      Public
      Library of utility functions for handling RPDR (Research Patient Data Registry) data.
      Python
      •0•3•0•0•Updated Apr 26, 2023Apr 26, 2023

    • datefilter

      Public
      Python
      •0•0•0•0•Updated Apr 19, 2023Apr 19, 2023

    • rpdr-converter

      Public
      Convert RPDR txt files to csv
      Python
      •0•0•0•0•Updated Jan 30, 2023Jan 30, 2023

    • csv-concat

      Public
      Utility to concatenate csv files
      Python
      •0•0•0•0•Updated Sep 21, 2022Sep 21, 2022

    • MLSym

      Public
      Deep learning for cancer symptoms monitoring on the basis of EHR unstructured clinical notes
      nlpdeep-learningehrclinical-notesnlp-parsingnerclinical-data
      Python
      •
      GNU General Public License v2.0
      •6•8•0•0•Updated Apr 6, 2022Apr 6, 2022

    • caregivers

      Public
      Code for "Associations Between Family Member Involvement and Outcomes of Patients Admitted to the Intensive Care Unit"
      Jupyter Notebook
      •1•0•0•11•Updated Mar 29, 2022Mar 29, 2022

    • pathml

      Public
      Tools for computational pathology
      Python
      •
      GNU General Public License v2.0
      •83•0•0•0•Updated Nov 16, 2021Nov 16, 2021

    • clinicalXLNet

      Public
      Clinical XLNet: Modeling Sequential Clinical Notes and Predicting Prolonged Mechanical Ventilation
      clinical-nlpxlnetpmv-prediction
      Python
      •12•46•5•0•Updated Aug 12, 2021Aug 12, 2021

    • vent_trach_study

      Public
      Jupyter Notebook
      •0•0•0•0•Updated May 31, 2020May 31, 2020

    • transformers_ner_cls

      Public
      Python
      •0•0•0•0•Updated May 20, 2020May 20, 2020

    • ClinicalRegex

      Public
      Python
      •1•0•0•0•Updated Mar 2, 2020Mar 2, 2020

    • RPDR_filter

      Public
      Python
      •0•0•0•0•Updated Feb 27, 2020Feb 27, 2020

    • NursingNotes

      Public
      Jupyter Notebook
      •0•0•0•0•Updated Feb 5, 2020Feb 5, 2020

    • PyCCI_Symptoms

      Public
      Clinical notes annotation tool (specifically for symptoms annotations), developed from EdwardMoseley/PyCCI
      Python
      •1•0•0•0•Updated Sep 14, 2018Sep 14, 2018

    • NeuroNER

      Public
      Named-entity recognition using neural networks. Easy-to-use and state-of-the-art results.
      Python
      •474•0•0•0•Updated Feb 15, 2018Feb 15, 2018