RPDR_filter

Install dependencies

sudo easy_install pip
pip3 install -r requirements.txt

Start the Program

python3 main.py

Convert RPDR to CSV

RPDR Filter

You could filter an RPDR note file to include only notes from patients of interest and only notes for those patients within a specified time range. This could be used, for example, to find notes for a patient that are within X days before and Y days after a certain procedure. Note that if you want notes between 30 days and 60 days after the procedure, `before_days` would be -30 days and `after_days` would be 60 days.

Filter file format

patient id	date	include (optional)
12345678	02/28/2020	1
11111111	01/01/2019	0

• The filter file should contain at least two columns: "patient ID (empi)" and "date (could be procedure date)"
• The default setting is including all the rows, but you could specify 1 or 0 to include or exclude that patient within a specified time range.
• Matches dates of formats: '%m/%d/%Y','%Y/%m/%d','%m/%d/%y','%m-%d-%Y','%Y-%m-%d','%m-%d-%y','%b %d, %Y','%b %d, %Y','%B %d, %Y','%B %d %Y','%b %d,%Y'

Output file

The output file has the same format as the origin with _filter_[before_days]-[after-days] added to the filename.