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stringApp with R #8

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kozo2 opened this issue Nov 27, 2019 · 21 comments
Closed

stringApp with R #8

kozo2 opened this issue Nov 27, 2019 · 21 comments

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kozo2 commented Nov 27, 2019

The original tutorial slides
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kozo2 commented Nov 27, 2019

Add "Prerequisties" 28a6f73

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kozo2 commented Nov 27, 2019

Add "Protein queries" a1d160e

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kozo2 commented Nov 27, 2019

Add "Compound queries" 168dc78

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kozo2 commented Nov 27, 2019

Add "Disease queries" f0a53c4

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kozo2 commented Nov 27, 2019

Add "PubMed queries" fddc70f

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kozo2 commented Nov 27, 2019

Add Exercise2 preface 86d621d

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kozo2 commented Nov 27, 2019

Add "Protein network retrieval" f47166a

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kozo2 commented Nov 27, 2019

Add "Discrete color mapping" part1 c00b8c2

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kozo2 commented Nov 27, 2019

Add "Discrete color mapping" part2 5564dda

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kozo2 commented Nov 27, 2019

Add "Data import" part1 b49b1cb

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kozo2 commented Nov 27, 2019

Add "Data import" part2 d95461d

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kozo2 commented Nov 27, 2019

Add "Data import" part3 edaa034

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kozo2 commented Nov 27, 2019

Add "Continuous color mapping" part1 ea50baf

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kozo2 commented Nov 27, 2019

Add "Disease network retrieval" 639b270

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kozo2 commented Nov 27, 2019

Add "Working with node attributes" a6b7dcc

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kozo2 commented Nov 27, 2019

Add "Merging networks"(unfinished) 96e23d5

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kozo2 commented Nov 27, 2019

Add "Functional enrichment" part1 080aa1e

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kozo2 commented Nov 27, 2019

Add "Functional enrichment" part2 c444f91

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kozo2 commented Nov 27, 2019

Add "Functional enrichment" part3 6596e90

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kozo2 commented Nov 27, 2019 •
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For now, stringApp does not support enrichment analysis command.
And CyREST does not support network merge.
I'm still on the way, but I will deploy this notebook once.
https://nrnb.org/gsod2019_kozo_nishida/html_documents/Rmd/stringApp.html

kozo2 added a commit that referenced this issue Nov 30, 2019
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#8 Fix "Download Rmd" link
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kozo2 commented Jan 9, 2021

Closed due to archiving of this repository.

@kozo2 kozo2 closed this as completed Jan 9, 2021
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