CI: Update FASTRACK_ARG to use --derivatives

nipreps · Jan 19, 2023 · 28805d6 · 28805d6
1 parent fdb69c0
commit 28805d6
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/.circleci/config.yml b/.circleci/config.yml
@@ -497,7 +497,7 @@ jobs:
           name: Run full fMRIPrep on ds005 (LegacyMultiProc plugin)
           no_output_timeout: 2h
           command: |
-            FASTRACK_ARG="--anat-derivatives /tmp/${DATASET}/smriprep"
+            FASTRACK_ARG="--derivatives anat=/tmp/${DATASET}/smriprep"
             if [ -f /tmp/.nofasttrack ]; then
                 FASTRACK_ARG=""
             fi
@@ -553,7 +553,7 @@ jobs:
           name: Re-run with BIDS layout
           no_output_timeout: 2h
           command: |
-            FASTRACK_ARG="--anat-derivatives /tmp/${DATASET}/smriprep"
+            FASTRACK_ARG="--derivatives anat=/tmp/${DATASET}/smriprep"
             if [ -f /tmp/.nofasttrack ]; then
                 FASTRACK_ARG=""
             fi
@@ -585,7 +585,7 @@ jobs:
           no_output_timeout: 2h
           command: |
             rm /tmp/data/${DATASET}/sub-01/func/*_run-01_*
-            FASTRACK_ARG="--anat-derivatives /tmp/${DATASET}/smriprep"
+            FASTRACK_ARG="--derivatives anat=/tmp/${DATASET}/smriprep"
             if [ -f /tmp/.nofasttrack ]; then
                 FASTRACK_ARG=""
             fi
@@ -700,7 +700,7 @@ jobs:
           name: Run full fMRIPrep on ds054
           no_output_timeout: 2h
           command: |
-            FASTRACK_ARG="--anat-derivatives /tmp/${DATASET}/smriprep"
+            FASTRACK_ARG="--derivatives anat=/tmp/${DATASET}/smriprep"
             if [ -f /tmp/.nofasttrack ]; then
                 FASTRACK_ARG=""
             fi
@@ -832,7 +832,7 @@ jobs:
           name: Run full fMRIPrep on ds000210
           no_output_timeout: 2h
           command: |
-            FASTRACK_ARG="--anat-derivatives /tmp/${DATASET}/smriprep"
+            FASTRACK_ARG="--derivatives anat=/tmp/${DATASET}/smriprep"
             if [ -f /tmp/.nofasttrack ]; then
                 FASTRACK_ARG=""
             fi