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Added cobra-meta and changed workflow figure #236

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Added cobra-meta and changed workflow figure

Added cobra-meta and changed workflow figure #236

Triggered via pull request April 18, 2024 16:56
@CarsonJMCarsonJM
synchronize #108
CarsonJM:add-cobra
Status Cancelled
Total duration 8m 37s
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218 errors and 218 warnings
modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/index/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/mash/sketch/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/gunzip/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/bowtie2/build/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/mash/screen/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/bacphlip/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/mash/paste/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/extractreps/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/aniclust/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/instrain/stb/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/appendscreenhits/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/extractviralassemblies/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_all_v_all_blast/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fastq_fasta_reference_containment_mash/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/qualityfilterviruses/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/cobrameta/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/multiqc/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/seqkit/seq/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/cat/cat/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-23.04
Process completed with exit code 1.
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-23.04
Process completed with exit code 1.
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-23.04
Process completed with exit code 1.
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-23.04
Process completed with exit code 1.
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/blast/blastn/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/fastq_align_bowtie2/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fastq_virus_enrichment_viromeqc/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/genomad/download/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_microdiversity_instrain/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/coverm/contig/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_phage_host_iphop/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/blast/makeblastdb/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/instrain/profile/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/pharokka/pharokka/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_genomad.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/checkv/downloaddatabase/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/fastqc/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/seqkit/seq/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_reference_no_reference.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/blast/makeblastdb/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/bacphlip/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/mash/screen/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/bowtie2/align/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/blast/blastn/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/bowtie2/build/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/extractreps/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/coverm/contig/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/instrain/stb/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/instrain/profile/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/cobrameta/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/mash/sketch/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/gunzip/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/mash/paste/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/viromeqc/install/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/appendscreenhits/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-latest-everything
Process completed with exit code 1.
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-latest-everything
Process completed with exit code 1.
workflows/phageannotator/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/cat/cat/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/qualityfilterviruses/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/aniclust/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/extractviralassemblies/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/pharokka/pharokka/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/fastqc/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/genomad/download/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_reference.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_reference.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_cobra.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_cobra.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/full_test.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/full_test.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_reference_no_reference.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_reference_no_reference.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fastq_fasta_reference_containment_mash/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fastq_fasta_reference_containment_mash/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-23.04
The operation was canceled.
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/multiqc/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/nf-core/multiqc/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/multiqc/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_iphop.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_iphop.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_iphop.nf.test docker NF-23.04
The operation was canceled.
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-23.04
The operation was canceled.
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_genomad.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/skip_genomad.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_all_v_all_blast/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fasta_all_v_all_blast/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/checkv/downloaddatabase/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/nf-core/checkv/downloaddatabase/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/fastq_align_bowtie2/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/fastq_align_bowtie2/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
workflows/phageannotator/tests/run_instrain.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_instrain.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-23.04
The operation was canceled.
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-23.04
The operation was canceled.
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
tests/main.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
tests/main.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
tests/main.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-23.04
The operation was canceled.
modules/local/viromeqc/install/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/local/viromeqc/install/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
modules/local/viromeqc/install/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_microdiversity_instrain/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fasta_microdiversity_instrain/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_instrain.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_instrain.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_instrain.nf.test docker NF-23.04
The operation was canceled.
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/samtools/index/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/nf-core/samtools/index/tests/main.nf.test docker NF-latest-everything
The operation was canceled.
modules/nf-core/samtools/index/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
modules/nf-core/bowtie2/align/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
modules/nf-core/bowtie2/align/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_phage_host_iphop/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fasta_phage_host_iphop/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/full_test.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/full_test.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/full_test.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_iphop.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_iphop.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-23.04
The operation was canceled.
subworkflows/local/fastq_virus_enrichment_viromeqc/tests/main.nf.test docker NF-latest-everything
The run was canceled by @CarsonJM.
subworkflows/local/fastq_virus_enrichment_viromeqc/tests/main.nf.test docker NF-latest-everything
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_cobra.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_cobra.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/run_cobra.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_reference.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_reference.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/run_reference.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-23.04
The run was canceled by @CarsonJM.
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-23.04
The operation was canceled.
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-23.04
❌ Failed to create checks using the provided token. (HttpError: Resource not accessible by integration)
Check for changes
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modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
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⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/index/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/index/tests/main.nf.test docker NF-23.04
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modules/nf-core/mash/sketch/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/mash/sketch/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/gunzip/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/gunzip/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/bowtie2/build/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/bowtie2/build/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/mash/screen/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/mash/screen/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/bacphlip/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/bacphlip/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/mash/paste/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/mash/paste/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/anicluster/extractreps/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/anicluster/extractreps/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/anicluster/aniclust/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/anicluster/aniclust/tests/main.nf.test docker NF-23.04
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modules/local/instrain/stb/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/instrain/stb/tests/main.nf.test docker NF-23.04
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modules/local/appendscreenhits/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/appendscreenhits/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/extractviralassemblies/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/extractviralassemblies/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_all_v_all_blast/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/local/fasta_all_v_all_blast/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fastq_fasta_reference_containment_mash/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/local/fastq_fasta_reference_containment_mash/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/qualityfilterviruses/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/qualityfilterviruses/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/cobrameta/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/cobrameta/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/multiqc/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/multiqc/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/seqkit/seq/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/seqkit/seq/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/untar/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/cat/cat/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/cat/cat/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/blast/blastn/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/blast/blastn/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/fastq_align_bowtie2/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/fastq_align_bowtie2/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fastq_virus_enrichment_viromeqc/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/local/fastq_virus_enrichment_viromeqc/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/genomad/download/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/genomad/download/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_microdiversity_instrain/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/local/fasta_microdiversity_instrain/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/coverm/contig/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/coverm/contig/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_phage_host_iphop/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
subworkflows/local/fasta_phage_host_iphop/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/blast/makeblastdb/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/blast/makeblastdb/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/instrain/profile/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/instrain/profile/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/pharokka/pharokka/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/pharokka/pharokka/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/skip_genomad.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
workflows/phageannotator/tests/skip_genomad.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/checkv/downloaddatabase/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/checkv/downloaddatabase/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/fastqc/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/fastqc/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/seqkit/seq/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/seqkit/seq/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_reference_no_reference.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
workflows/phageannotator/tests/run_reference_no_reference.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/blast/makeblastdb/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/blast/makeblastdb/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/bacphlip/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/bacphlip/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/mash/screen/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/mash/screen/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/bowtie2/align/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/bowtie2/align/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/blast/blastn/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/blast/blastn/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/bowtie2/build/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/bowtie2/build/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/idxstats/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/anicluster/extractreps/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/anicluster/extractreps/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/coverm/contig/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/coverm/contig/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/instrain/stb/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/instrain/stb/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/instrain/profile/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/instrain/profile/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/untar/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/cobrameta/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/cobrameta/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/stats/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/mash/sketch/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/mash/sketch/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/flagstat/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/gunzip/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/gunzip/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/mash/paste/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/mash/paste/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/viromeqc/install/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/viromeqc/install/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/appendscreenhits/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/appendscreenhits/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/checkv/endtoend/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/main.nf.test docker NF-23.04
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
workflows/phageannotator/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/cat/cat/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/cat/cat/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/qualityfilterviruses/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/qualityfilterviruses/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/anicluster/aniclust/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/anicluster/aniclust/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/extractviralassemblies/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/local/extractviralassemblies/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/pharokka/pharokka/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/pharokka/pharokka/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/samtools/sort/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/fastqc/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/fastqc/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/genomad/download/tests/main.nf.test docker NF-latest-everything
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: nf-core/setup-nextflow@v1, actions/setup-python@v4, actions/cache@v3, mikepenz/action-junit-report@v3. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
modules/nf-core/genomad/download/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/anicluster/anicalc/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_viromeqc.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_reference.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_cobra.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/full_test.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_reference_no_reference.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/pharokka/installdatabases/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fastq_fasta_reference_containment_mash/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfcore_pipeline/tests/main.function.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_virus_quality_checkv/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/multiqc/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_iphop.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fastq_fasta_contig_extension_cobra/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.function.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/skip_genomad.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_all_v_all_blast/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/checkv/downloaddatabase/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/bam_sort_stats_samtools/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/fastq_align_bowtie2/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/viromeqc/viromeqc/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_instrain.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_virus_classification_genomad/tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_bacphlip.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nextflow_pipeline/tests/main.workflow.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
tests/main.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/local/viromeqc/install/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/skip_checkv.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_genomad_taxonomy.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_microdiversity_instrain/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_instrain.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/utils_nfvalidation_plugin/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/samtools/index/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/nf-core/bam_stats_samtools/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
modules/nf-core/bowtie2/align/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_phage_host_iphop/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/full_test.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fasta_phage_function_pharokka/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_iphop.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/skip_virus_clustering.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
subworkflows/local/fastq_virus_enrichment_viromeqc/tests/main.nf.test docker NF-latest-everything
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_cobra.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_reference.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23
workflows/phageannotator/tests/run_pharokka.nf.test docker NF-23.04
⚠️ This usually indicates insufficient permissions. More details: https://github.com/mikepenz/action-junit-report/issues/23