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Add SLURM profile #37

Merged
merged 13 commits into from
Nov 19, 2024
Merged

Add SLURM profile #37

merged 13 commits into from
Nov 19, 2024

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farchaab
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@farchaab farchaab commented Nov 8, 2024

Summary

PR to test SLURM support and add SLURM example config

Details

  • 60993ed Removed sdm and prefix args to stop overwriting profile options
  • e1216bc Updated default container chache dir to .snakemake/singularity
  • afec0a6 Added back checkpoint input for simulators
  • 684cb22 Mount output as well as workflow basedir
  • 68be3fd Added SLURM example profile in mess/profiles/slurm

@farchaab farchaab marked this pull request as ready for review November 19, 2024 09:48
@farchaab farchaab changed the title Added SLURM profile Add SLURM profile Nov 19, 2024
@farchaab farchaab merged commit 7f7d2e0 into main Nov 19, 2024
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@farchaab farchaab deleted the slurm branch November 19, 2024 09:48
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