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TRUST4 v1.1.2
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@mourisl mourisl released this 08 Jul 16:47
· 62 commits to master since this release
v1.1.2
7ef8d05
  • Detect special gaps in V genes from IMGT, e.g. mouse TRAV genes, and adjust the CDR3 coordinate accordingly.
  • Always realign the reads to the contigs for abundance estimation. Orignally, this step is skipped in barcoded data. (#281 )
  • Change the definition of the "complete_vdj" column as the sequence with 5' V to 3' J sequence. Originally, it requires the presence of C gene.
  • Fix a bug in the airr_alignment file from annotator that may miss some column for contigs with CDR3 information
  • Fix a bug of wrong V, J gene range after imputing TCRs
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