Update run.py - add_dynamic_args #291

	---
	name: Lint workflow

	on:
	push:
	branches: ['', '!push-action/']
	pull_request:
	branches: ['', '!push-action/']

	jobs:
	quality:
	name: Lint code
	if: github.event.pull_request.merged == false
	runs-on: ubuntu-latest

	steps:
	- name: Clone repo
	uses: actions/checkout@master

	- name: Setup Python 3.10
	uses: actions/setup-python@v2
	with:
	python-version: '3.10'

	- uses: actions/cache@v2
	with:
	path: ~/.cache/pip
	key: ${{ runner.os }}-pip-3.10
	restore-keys: ${{ runner.os }}-pip-3.10

	- name: Install Poetry
	uses: snok/install-poetry@v1
	with:
	version: 1.2.0
	virtualenvs-create: true
	virtualenvs-in-project: true

	- name: Load cached venv
	id: cached-poetry-dependencies
	uses: actions/cache@v2
	with:
	path: .venv
	key: venv-${{ runner.os }}-${{ hashFiles('**/poetry.lock') }}-3.10

	- name: Install dependencies
	if: steps.cached-poetry-dependencies.outputs.cache-hit != 'true'
	run: poetry install --no-interaction --no-root --with dev

	- name: yamlfix
	run: poetry run poe yamlfix-check

	- name: isort
	run: poetry run poe isort-check

	- name: black
	run: poetry run poe black-check

	- name: flake8
	run: poetry run poe flake8

	- name: snakefmt
	run: poetry run poe snakefmt-check

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