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linx v1.16

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@charlesshale charlesshale released this 21 Jun 02:48
· 9241 commits to master since this release

Functional:

  • IG downstream parter checks coding bases rather than coding region
  • ignore non-disruptive breakends in fusion chain-termination test

Visualiser:

  • optionally plot all genes in breakends for a cluster, config: plot_cluster_genes
  • optionally plot any cluster with reported fusion, disruption, or driver, config: plot_reportable
  • write reportable disruptions to vis files

Technical:

  • renamed module from sv-linx to linx