test species but with the right file this time

h3abionet · Jan 6, 2025 · 04a9b0f · 04a9b0f
1 parent 90b795d
commit 04a9b0f
Showing 1 changed file with 2 additions and 3 deletions.
diff --git a/conf/test.config b/conf/test.config
@@ -11,7 +11,7 @@
 */
 
 params {
-    config_profile_name        = 'Test profile'
+    config_profile_name        = 'Test MiSeq 16S profile'
     config_profile_description = 'Minimal test dataset to check pipeline function'
 
     // Limit resources so that this can run on GitHub Actions
@@ -27,6 +27,5 @@ params {
     trim_rev   = 25
     reference = 'https://file-server.igb.illinois.edu/~cjfields/TADA/silva_nr99_v138.1_train_set.fa.gz'
     run_tree   = 'fasttree'
-    // TODO: figure out why species fails w/ CI
-    // species   = 'https://file-server.igb.illinois.edu/~cjfields/TADA/silva_nr99_v138.1_wSpecies_train_set.fa.gz'
+    species   = 'https://zenodo.org/records/4587955/files/silva_species_assignment_v138.1.fa.gz?download=1'
 }