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{bio}[GCC/11.3.0] Bismark v0.24.0 #17610

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bedroge
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@bedroge bedroge commented Mar 28, 2023

(created using eb --new-pr)

Used GCC instead of foss, as all dependencies are using GCC(core) as well, and it doesn't need things like MPI.

@bedroge bedroge added the update label Mar 28, 2023
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bedroge commented Mar 28, 2023

Test report by @bedroge
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
bob-Latitude-5300 - Linux Ubuntu 22.04, x86_64, Intel(R) Core(TM) i7-8665U CPU @ 1.90GHz, Python 3.10.6
See https://gist.github.com/bedroge/b5e247f85f6bd91d3d7ed3502c0d76dd for a full test report.

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bedroge commented Mar 28, 2023

@boegelbot please test @ generoso

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@bedroge: Request for testing this PR well received on login1

PR test command 'EB_PR=17610 EB_ARGS= EB_CONTAINER= /opt/software/slurm/bin/sbatch --job-name test_PR_17610 --ntasks=4 ~/boegelbot/eb_from_pr_upload_generoso.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 10548

Test results coming soon (I hope)...

- notification for comment with ID 1486754964 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
cns1 - Linux Rocky Linux 8.5, x86_64, Intel(R) Xeon(R) CPU E5-2667 v3 @ 3.20GHz (haswell), Python 3.6.8
See https://gist.github.com/boegelbot/94e8325aaaba78005fba454afd704794 for a full test report.

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bedroge commented Mar 28, 2023

Test report by @bedroge
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
interactive1 - Linux Rocky Linux 8.7, x86_64, Intel Xeon Processor (Cascadelake), Python 3.6.8
See https://gist.github.com/bedroge/baa2e6d12ff6b0d87219da454e5c9e64 for a full test report.

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bedroge commented Mar 28, 2023

@boegelbot please test @ jsc-zen2

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@bedroge: Request for testing this PR well received on jsczen2l1.int.jsc-zen2.easybuild-test.cluster

PR test command 'EB_PR=17610 EB_ARGS= /opt/software/slurm/bin/sbatch --mem-per-cpu=4000M --job-name test_PR_17610 --ntasks=8 ~/boegelbot/eb_from_pr_upload_jsc-zen2.sh' executed!

  • exit code: 0
  • output:
Submitted batch job 2414

Test results coming soon (I hope)...

- notification for comment with ID 1486772563 processed

Message to humans: this is just bookkeeping information for me,
it is of no use to you (unless you think I have a bug, which I don't).

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Test report by @boegelbot
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
jsczen2c1.int.jsc-zen2.easybuild-test.cluster - Linux Rocky Linux 8.5, x86_64, AMD EPYC 7742 64-Core Processor (zen2), Python 3.6.8
See https://gist.github.com/boegelbot/9833ae57c4cc312cc5a0a125cd1af32f for a full test report.

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Test report by @branfosj
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
bear-pg0105u03a.bear.cluster - Linux RHEL 8.6, x86_64, Intel(R) Xeon(R) Platinum 8360Y CPU @ 2.40GHz (icelake), Python 3.6.8
See https://gist.github.com/branfosj/20ca0ceaeeab8a6e189cf144588d2f12 for a full test report.

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Test report by @branfosj
SUCCESS
Build succeeded for 1 out of 1 (1 easyconfigs in total)
bear-pg0211u03a.bear.cluster - Linux Ubuntu 20.04.2 LTS (Focal Fossa), x86_64, Intel(R) Xeon(R) Gold 6248 CPU @ 2.50GHz (cascadelake), Python 3.8.5
See https://gist.github.com/branfosj/1ac56e21e6f17a18533d6cdad26f00ed for a full test report.

@branfosj branfosj added this to the next release (4.7.2?) milestone Mar 29, 2023
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Going in, thanks @bedroge!

@branfosj branfosj merged commit 63c4b25 into easybuilders:develop Mar 29, 2023
@bedroge bedroge deleted the 20230328132212_new_pr_Bismark0240 branch March 29, 2023 18:01
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3 participants