👷 update framework

.github/workflows/cd.yml

@@ -10,7 +10,7 @@ on:
 jobs:
   python-packaging:
     name: 🐍 Packaging
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-packaging.yml@v1.1.5
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-packaging.yml@v1.3
     with:
       pure-python: true
 
@@ -23,13 +23,19 @@ jobs:
       url: https://pypi.org/p/mqt.bench
     permissions:
       id-token: write
+      attestations: write
+      contents: read
     needs: [python-packaging]
     steps:
       - uses: actions/download-artifact@v4
         with:
           pattern: cibw-*
           path: dist
           merge-multiple: true
+      - name: Generate artifact attestation for sdist and wheel(s)
+        uses: actions/attest-build-provenance@v1.4.1
+        with:
+          subject-path: "dist/*"
       - uses: pypa/gh-action-pypi-publish@release/v1
 
   upload_webserver:

.github/workflows/ci.yml

@@ -14,19 +14,21 @@ concurrency:
 jobs:
   change-detection:
     name: 🔍 Change
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-change-detection.yml@v1.1.5
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-change-detection.yml@v1.3
 
   python-tests:
     name: 🐍 Test
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-python-tests)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-ci.yml@v1.1.5
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-python-ci.yml@v1.3
+    with:
+      skip-testing-latest-python: true
 
   code-ql:
     name: 📝 CodeQL
     needs: change-detection
     if: fromJSON(needs.change-detection.outputs.run-code-ql)
-    uses: cda-tum/mqt-workflows/.github/workflows/reusable-code-ql-python.yml@v1.1.5
+    uses: cda-tum/mqt-workflows/.github/workflows/reusable-code-ql-python.yml@v1.3
 
   required-checks-pass: # This job does nothing and is only used for branch protection
     name: 🚦 Check

.pre-commit-config.yaml

@@ -15,7 +15,7 @@ ci:
 repos:
   # Standard hooks
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: "v4.6.0"
+    rev: v4.6.0
     hooks:
       - id: check-added-large-files
       - id: check-case-conflict
@@ -28,9 +28,20 @@ repos:
       - id: mixed-line-ending
       - id: trailing-whitespace
 
+  # Clean jupyter notebooks
+  - repo: https://github.com/srstevenson/nb-clean
+    rev: 3.3.0
+    hooks:
+      - id: nb-clean
+        args:
+          - --remove-empty-cells
+          - --preserve-cell-metadata
+          - raw_mimetype
+          - --
+
   # Handling unwanted unicode characters
   - repo: https://github.com/sirosen/texthooks
-    rev: "0.6.6"
+    rev: 0.6.7
     hooks:
       - id: fix-ligatures
       - id: fix-smartquotes
@@ -43,34 +54,13 @@ repos:
       - id: rst-directive-colons
       - id: rst-inline-touching-normal
 
-  # Clean jupyter notebooks
-  - repo: https://github.com/srstevenson/nb-clean
-    rev: "3.3.0"
-    hooks:
-      - id: nb-clean
-  # Check for spelling
-  - repo: https://github.com/codespell-project/codespell
-    rev: "v2.3.0"
-    hooks:
-      - id: codespell
-        args: ["-L", "wille,linz,fro"]
-        exclude: "mqt/bench/viewer/templates/legal.html"
-
-  # Format configuration files with prettier
-  - repo: https://github.com/pre-commit/mirrors-prettier
-    rev: "v4.0.0-alpha.8"
-    hooks:
-      - id: prettier
-        types_or: [yaml, markdown, html, css, javascript, json]
-
+  # Python linting and formatting using ruff
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.5.5
+    rev: v0.6.1
     hooks:
       - id: ruff
         args: ["--fix", "--show-fixes"]
-        types_or: [python, pyi, jupyter]
       - id: ruff-format
-        types_or: [python, pyi, jupyter]
 
   # Also run Black on examples in the documentation
   - repo: https://github.com/adamchainz/blacken-docs
@@ -79,11 +69,19 @@ repos:
       - id: blacken-docs
         additional_dependencies: [black==24.*]
 
+  # Format configuration files with prettier
+  - repo: https://github.com/rbubley/mirrors-prettier
+    rev: v3.3.3
+    hooks:
+      - id: prettier
+        types_or: [yaml, markdown, html, css, scss, javascript, json]
+
+  # Check static types with mypy
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.11.0
+    rev: v1.11.1
     hooks:
       - id: mypy
-        files: ^(src|tests)
+        files: ^(src/mqt|test/python)
         args: []
         additional_dependencies:
           - pytket_qiskit
@@ -97,6 +95,13 @@ repos:
           - types-tqdm
           - types-flask
 
+  # Check for spelling
+  - repo: https://github.com/crate-ci/typos
+    rev: v1.23.6
+    hooks:
+      - id: typos
+        exclude: legal.html
+
   # Catch common capitalization mistakes
   - repo: local
     hooks:
@@ -108,7 +113,21 @@ repos:
 
   # Check best practices for scientific Python code
   - repo: https://github.com/scientific-python/cookie
-    rev: 2024.04.23
+    rev: 2024.08.19
     hooks:
       - id: sp-repo-review
         additional_dependencies: ["repo-review[cli]"]
+
+  # Check JSON schemata
+  - repo: https://github.com/python-jsonschema/check-jsonschema
+    rev: 0.29.1
+    hooks:
+      - id: check-dependabot
+      - id: check-github-workflows
+      - id: check-readthedocs
+
+  # Check the pyproject.toml file
+  - repo: https://github.com/henryiii/validate-pyproject-schema-store
+    rev: 2024.08.19
+    hooks:
+      - id: validate-pyproject

noxfile.py

@@ -16,7 +16,7 @@
 nox.options.default_venv_backend = "uv|virtualenv"
 
 
-PYTHON_ALL_VERSIONS = ["3.10", "3.11", "3.12"]
+PYTHON_ALL_VERSIONS = ["3.10", "3.11", "3.12", "3.13"]
 
 BUILD_REQUIREMENTS = [
     "setuptools>=66.1",

pyproject.toml

@@ -21,6 +21,7 @@ dynamic = ["version"]
 dependencies = [
     "pytket-qiskit>=0.53.0",  #  manages the dependencies for qiskit and tket in a combined fashion
     "pytket>=1.29.0",  # lowest version that supports the used pytket AutoRebase pass instead of auto_rebase
+    "qiskit!=1.2.0",  # there is a bug in 1.2.0 that causes an error some benchmarks, see https://github.com/Qiskit/qiskit/issues/12969
     "qiskit_optimization>=0.6",
     "qiskit_nature[pyscf]>=0.7",
     "qiskit_finance>=0.4.1",
@@ -45,6 +46,7 @@ classifiers = [
     "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
     "Intended Audience :: Science/Research",
     "Natural Language :: English",
     "Topic :: Scientific/Engineering :: Electronic Design Automation (EDA)",
@@ -92,15 +94,23 @@ log_cli_level = "INFO"
 xfail_strict = true
 filterwarnings = [
     "error",
-    "ignore:.*pkg_resources.*:DeprecationWarning:",
-    "ignore:.*sre_.*:DeprecationWarning:",
-    "ignore:.*Rigetti.*:UserWarning:",
-    "ignore:.*Values in x.*:RuntimeWarning:",
-    "ignore:.*divide by zero encountered in det.*:RuntimeWarning:",
-    "ignore:.*invalid value encountered in det.*:RuntimeWarning:",
-    "ignore::DeprecationWarning:.*(docplex).*",
-    "ignore::SyntaxWarning:.*(docplex).*",
-    "ignore:.*The abstract Provider and ProviderV1 classes are deprecated.*:DeprecationWarning:qiskit.*",
+    'ignore:.*pkg_resources.*:DeprecationWarning:',
+    'ignore:.*sre_.*:DeprecationWarning:',
+    'ignore:.*Rigetti.*:UserWarning:',
+    'ignore:.*Values in x.*:RuntimeWarning:',
+    'ignore:.*divide by zero encountered in det.*:RuntimeWarning:',
+    'ignore:.*invalid value encountered in det.*:RuntimeWarning:',
+    'ignore::DeprecationWarning:.*(docplex).*',
+    'ignore::SyntaxWarning:.*(docplex).*',
+    'ignore:.*The abstract Provider and ProviderV1 classes are deprecated.*:DeprecationWarning:qiskit.*',
+    'ignore:.*qiskit.providers.models is deprecated since Qiskit 1.2*:DeprecationWarning:',
+    'ignore:.*Treating CircuitInstruction as an iterable is deprecated legacy behavior since Qiskit 1.2*:DeprecationWarning:pytket.*',
+    'ignore:.*qiskit.providers.models.* is deprecated since qiskit 1.2*:DeprecationWarning:qiskit.*',
+    'ignore:.*qiskit.providers.models.* is deprecated as of qiskit 1.2*:DeprecationWarning:qiskit.*',
+    'ignore:.*qiskit.primitives.* is deprecated as of qiskit 1.2*:DeprecationWarning:qiskit.*',
+    'ignore:.*The class ``qiskit.qobj.pulse_qobj.PulseLibraryItem`` is deprecated as of qiskit 1.2.*:DeprecationWarning:qiskit.*',
+    'ignore:.*The class ``qiskit.primitives.sampler.Sampler`` is deprecated as of qiskit 1.2*:DeprecationWarning:mqt.*',
+    'ignore:.*The class ``qiskit.primitives.estimator.Estimator`` is deprecated as of qiskit 1.2*:DeprecationWarning:mqt.*',
 ]
 
 [tool.coverage]
@@ -137,7 +147,6 @@ ignore_missing_imports = true
 [tool.ruff]
 line-length = 120
 extend-include = ["*.ipynb"]
-src = ["src"]
 preview = true
 unsafe-fixes = true
 
@@ -202,3 +211,18 @@ isort.required-imports = ["from __future__ import annotations"]
 
 [tool.ruff.lint.pydocstyle]
 convention = "google"
+
+
+[tool.typos]
+default.extend-ignore-re = [
+  '"id": ".*",',
+  "(?Rm)^.*(#|//)\\s*spellchecker:disable-line$",  # ignore line
+  "(?s)(#|//)\\s*spellchecker:off.*?\\n\\s*(#|//)\\s*spellchecker:on" # ignore block
+]
+[tool.typos.default.extend-words]
+wille = "wille"
+anc = "anc"
+aer = "aer"
+fom = "fom"
+bench = "bench"
+benchs = "benchs"

src/mqt/bench/benchmark_generator.py

@@ -27,12 +27,8 @@
 
     from pytket.circuit import Circuit
 
-if TYPE_CHECKING or sys.version_info >= (3, 10, 0):  # pragma: no cover
-    from importlib import resources
-else:
-    import importlib_resources as resources
-
 from dataclasses import dataclass
+from importlib import resources
 
 
 class Benchmark(TypedDict, total=False):
@@ -359,11 +355,6 @@ def get_benchmark(
     Returns:
         Quantum Circuit Object representing the benchmark with the selected options, either as Qiskit::QuantumCircuit or Pytket::Circuit object (depending on the chosen compiler---while the algorithm level is always provided using Qiskit)
     """
-    if "gate_set_name" in kwargs:
-        msg = "gate_set_name is deprecated and will be removed in a future release. Use provider_name instead."
-        warn(msg, DeprecationWarning, stacklevel=2)
-        provider_name = kwargs["gate_set_name"]
-
     if benchmark_name not in utils.get_supported_benchmarks():
         msg = f"Selected benchmark is not supported. Valid benchmarks are {utils.get_supported_benchmarks()}."
         raise ValueError(msg)

src/mqt/bench/benchmarks/random.py

@@ -1,4 +1,4 @@
-"""Random benchmark definition."""
+"""Random benchmark definition."""  # noqa: A005
 
 from __future__ import annotations
 

src/mqt/bench/devices/calibration.py

@@ -77,7 +77,7 @@ def get_two_qubit_gate_fidelity(self, gate_type: str, qubit1: int, qubit2: int)
             raise ValueError(msg)
 
         try:
-            return self.two_qubit_gate_fidelity[(qubit1, qubit2)][gate_type]
+            return self.two_qubit_gate_fidelity[qubit1, qubit2][gate_type]
         except KeyError:
             msg = f"Two-qubit fidelity for gate {gate_type} and qubits {qubit1} and {qubit2} not available."
             raise ValueError(msg) from None
@@ -95,7 +95,7 @@ def get_two_qubit_gate_duration(self, gate_type: str, qubit1: int, qubit2: int)
             raise ValueError(msg)
 
         try:
-            return self.two_qubit_gate_duration[(qubit1, qubit2)][gate_type]
+            return self.two_qubit_gate_duration[qubit1, qubit2][gate_type]
         except KeyError:
             msg = f"Two-qubit duration for gate {gate_type} and qubits {qubit1} and {qubit2} not available."
             raise ValueError(msg) from None

src/mqt/bench/devices/device.py

@@ -140,7 +140,7 @@ def get_two_qubit_gates(self) -> set[str]:
         return {
             gate
             for qubit1, qubit2 in self.coupling_map
-            for gate in self.calibration.two_qubit_gate_fidelity[(qubit1, qubit2)]
+            for gate in self.calibration.two_qubit_gate_fidelity[qubit1, qubit2]
         }
 
     def sanitize_device(self) -> None: