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Make CreateAltAlleleTable task volatile #8011

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merged 2 commits into from
Sep 7, 2022
Merged

Make CreateAltAlleleTable task volatile #8011

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db85dfc
make CreateAltAlleleTable task volatile
rsasch Sep 6, 2022
43247b7
Merge branch 'ah_var_store' into rsa_alt_allele_volatile
rsasch Sep 7, 2022
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6 changes: 0 additions & 6 deletions .dockstore.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -118,7 +118,6 @@ workflows:
branches:
- master
- ah_var_store
- ah_vs_565_output_intervals_and_sample_list
- name: GvsImportGenomes
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsImportGenomes.wdl
Expand Down Expand Up @@ -160,7 +159,6 @@ workflows:
branches:
- master
- ah_var_store
- rc-update-clinvar-validate-vat
- name: GvsExtractCohortFromSampleNames
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsExtractCohortFromSampleNames.wdl
Expand All @@ -182,23 +180,20 @@ workflows:
branches:
- master
- ah_var_store
- ah_vs_565_output_intervals_and_sample_list
- name: GvsJointVariantCalling
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsJointVariantCalling.wdl
filters:
branches:
- master
- ah_var_store
- ah_vs_565_output_intervals_and_sample_list
- name: GvsJointVariantCallsetCost
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsJointVariantCallsetCost.wdl
filters:
branches:
- master
- ah_var_store
- rc-wrap-the-cost
- name: GvsCalculatePrecisionAndSensitivity
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsCalculatePrecisionAndSensitivity.wdl
Expand Down Expand Up @@ -227,7 +222,6 @@ workflows:
branches:
- master
- ah_var_store
- cost_robustitude
- name: GvsExtractAvroFilesForHail
subclass: WDL
primaryDescriptorPath: /scripts/variantstore/wdl/GvsExtractAvroFilesForHail.wdl
Expand Down
3 changes: 2 additions & 1 deletion scripts/variantstore/wdl/GvsPopulateAltAllele.wdl
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Expand Up @@ -158,7 +158,8 @@ task CreateAltAlleleTable {
String project_id
}
meta {
# Not `volatile: true` since there shouldn't be a need to re-run this if there has already been a successful execution.
# should always be run; if the table already exists, no harm no foul
volatile: true
}

# add labels for DSP Cloud Cost Control Labeling and Reporting
Expand Down