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Correct mis-mapping of chr 5 for RWB [VS-1605]
Build and Test GATK 4 #5081: Pull request #9109 opened by mcovarr
March 3, 2025 19:28 In progress vs_1605_chr5_oops
March 3, 2025 19:28 In progress
PR #9109
CodeQL #950: by mcovarr
March 3, 2025 19:28 10m 58s refs/pull/9109/head
March 3, 2025 19:28 10m 58s
Push on ah_var_store
CodeQL #949: by mcovarr
March 3, 2025 15:13 10m 58s ah_var_store
March 3, 2025 15:13 10m 58s
Foxtrot scale test ingest [VS-1593]
Build and Test GATK 4 #5080: Pull request #9107 opened by mcovarr
March 3, 2025 12:56 5h 8m 46s vs_1593_foxtrot_scale_test_ingest
March 3, 2025 12:56 5h 8m 46s
PR #9107
CodeQL #948: by mcovarr
March 3, 2025 12:56 11m 14s refs/pull/9107/head
March 3, 2025 12:56 11m 14s
VAT creation on GCP Batch [VS-1602]
Build and Test GATK 4 #5079: Pull request #9106 opened by mcovarr
March 3, 2025 12:53 5h 22m 50s vs_1602_vat_creation_on_gcp_batch
March 3, 2025 12:53 5h 22m 50s
PR #9106
CodeQL #947: by mcovarr
March 3, 2025 12:53 11m 14s refs/pull/9106/head
March 3, 2025 12:53 11m 14s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1063: Scheduled
March 3, 2025 05:24 11m 51s master
March 3, 2025 05:24 11m 51s
Extract avros for a VDS but only include the NEW samples that are in Foxtrot
Build and Test GATK 4 #5078: Pull request #9105 opened by RoriCremer
March 3, 2025 02:48 6h 0m 27s rc-vs-1576-avro-update
March 3, 2025 02:48 6h 0m 27s
PR #9105
CodeQL #946: by RoriCremer
March 3, 2025 02:47 10m 55s refs/pull/9105/head
March 3, 2025 02:47 10m 55s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1062: Scheduled
March 2, 2025 05:24 11m 45s master
March 2, 2025 05:24 11m 45s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1061: Scheduled
March 1, 2025 05:23 11m 57s master
March 1, 2025 05:23 11m 57s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1060: Scheduled
February 28, 2025 05:24 11m 46s master
February 28, 2025 05:24 11m 46s
GtfToBed errors out with because "gene" is null
carrot-test-run-from-pr-comment #5451: Issue comment #9103 (comment) created by mmahmoudian
February 27, 2025 19:54 15s
February 27, 2025 19:54 15s
GCP Batch-friendly Cromwell root detection [VS-1532] (#9069)
Build and Test GATK 4 #5077: Pull request #9102 synchronize by mcovarr
February 27, 2025 16:55 4h 50m 43s vs_1597_aou_rwb_google_batch
February 27, 2025 16:55 4h 50m 43s
GCP Batch-friendly Cromwell root detection [VS-1532] (#9069)
carrot-test-run-from-pr-comment #5450: Issue comment #9102 (comment) created by mcovarr
February 27, 2025 16:51 15s
February 27, 2025 16:51 15s
GtfToBed errors out with because "gene" is null
carrot-test-run-from-pr-comment #5449: Issue comment #9103 (comment) created by gokalpcelik
February 27, 2025 12:41 15s
February 27, 2025 12:41 15s
Build and Upload GATK Nightly Docker Image
Build and Upload GATK Nightly Docker Image #1059: Scheduled
February 27, 2025 05:24 11m 27s master
February 27, 2025 05:24 11m 27s
GCP Batch-friendly Cromwell root detection [VS-1532] (#9069)
Build and Test GATK 4 #5076: Pull request #9102 opened by mcovarr
February 26, 2025 21:42 6h 0m 24s vs_1597_aou_rwb_google_batch
February 26, 2025 21:42 6h 0m 24s
BQSR can produce tables with missing ReadGroups
carrot-test-run-from-pr-comment #5448: Issue comment #6242 (comment) created by takutosato
February 26, 2025 19:53 10s
February 26, 2025 19:53 10s
gradle in for org.eclipse.jetty:jetty-http - Update #971210587
Dependabot Updates #102: by dependabot bot
February 26, 2025 19:51 39s master
February 26, 2025 19:51 39s
gradle in for ch.qos.logback:logback-core - Update #971210596
Dependabot Updates #101: by dependabot bot
February 26, 2025 19:51 40s master
February 26, 2025 19:51 40s
gradle in for io.netty:netty-common - Update #971210595
Dependabot Updates #100: by dependabot bot
February 26, 2025 19:51 39s master
February 26, 2025 19:51 39s
gradle in for org.apache.hadoop:hadoop-common - Update #971210594
Dependabot Updates #99: by dependabot bot
February 26, 2025 19:51 56s master
February 26, 2025 19:51 56s
gradle in for com.thoughtworks.xstream:xstream - Update #971210586
Dependabot Updates #98: by dependabot bot
February 26, 2025 19:51 46s master
February 26, 2025 19:51 46s