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Merge pull request #312 from tsalo/fix-entities
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[FIX] Add CBV and phase to Entity table
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effigies authored Aug 20, 2019
2 parents 7186db8 + fa3cbb3 commit aed8596
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Expand Up @@ -214,9 +214,9 @@ based fMRI a corresponding task events file (see below) MUST be provided
multiband acquisitions, one MAY also save the single-band reference image as
type `sbref` (e.g. `sub-control01_task-nback_sbref.nii.gz`).

Each task has a unique label MUST only include of letters and/or numbers (other
characters including spaces and underscores are not allowed). Those labels MUST
be consistent across subjects and sessions.
Each task has a unique label that MUST only consist of letters and/or numbers
(other characters, including spaces and underscores, are not allowed).
Those labels MUST be consistent across subjects and sessions.

If more than one run of the same task has been acquired a key/value pair:
`_run-1`, `_run-2`, `_run-3` etc. MUST be used. If only one run was acquired the
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2 changes: 1 addition & 1 deletion src/99-appendices/04-entity-table.md
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Expand Up @@ -15,7 +15,7 @@ A general introduction to entities is given in the section on
| Format | `sub-<label>` | `ses-<label>` | `task-<label>` | `acq-<label>` | `ce-<label>` | `rec-<label>` | `dir-<label>` | `run-<index>` | `mod-<label>` | `echo-<index>` | `recording-<label>` | `proc-<label>` | `space-<label>` |
| anat<br>(T1w T2w T1rho T1map T2map T2star FLAIR FLASH PD PDmap PDT2 inplaneT1 inplaneT2 angio) | REQUIRED | OPTIONAL | | OPTIONAL | OPTIONAL | OPTIONAL | | | | | | | |
| anat<br>(defacemask) | REQUIRED | OPTIONAL | | OPTIONAL | OPTIONAL | OPTIONAL | | | OPTIONAL | | | | |
| func<br>(bold sbref events) | REQUIRED | OPTIONAL | REQUIRED | OPTIONAL | OPTIONAL | OPTIONAL | OPTIONAL | OPTIONAL | | OPTIONAL | | | |
| func<br>(bold cbv phase sbref events) | REQUIRED | OPTIONAL | REQUIRED | OPTIONAL | OPTIONAL | OPTIONAL | OPTIONAL | OPTIONAL | | OPTIONAL | | | |
| func<br>(physio stim) | REQUIRED | OPTIONAL | REQUIRED | OPTIONAL | | OPTIONAL | | OPTIONAL | | | OPTIONAL | OPTIONAL | |
| dwi<br>(dwi bvec bval) | REQUIRED | OPTIONAL | | OPTIONAL | | | OPTIONAL | OPTIONAL | | | | | |
| fmap<br>(phasediff phase1 phase2 magnitude1 magnitude2 magnitude fieldmap) | REQUIRED | OPTIONAL | | OPTIONAL | | | | OPTIONAL | | | | | |
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