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Complete CurrentDomain support (#737)
* Add CurrentDomain getter and setter for ArraySchemaExperimental * Add external pointer tag checks * Two micro corrections * R functions to set and get current domain to and from schema * Correction for older than 2.25.0 build * Ensure new examples are versioned * Array Schema and Array Schema Evolution support * Correct current domain data type use * Complete CurrentDomain support with extended tests * Refinments for builds under older TileDB Embedded versions
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Original file line number | Diff line number | Diff line change |
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library(tinytest) | ||
library(tiledb) | ||
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ctx <- tiledb_ctx(limitTileDBCores()) | ||
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if (tiledb_version(TRUE) < "2.25.0") exit_file("These tests needs TileDB 2.25.0 or later") | ||
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expect_silent(intdim <- tiledb_dim("dim", c(1L, 100L), type = "INT32")) | ||
expect_silent(intdom <- tiledb_domain(dim = intdim)) | ||
expect_silent(ndr <- tiledb_ndrectangle(intdom)) | ||
expect_silent(tiledb_ndrectangle_set_range(ndr, "dim", 41L, 42L)) | ||
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expect_silent(cd <- tiledb_current_domain()) | ||
expect_true(tiledb_current_domain_is_empty(cd)) | ||
expect_error(tiledb_current_domain_get_type(cd)) | ||
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expect_silent(cd <- tiledb_current_domain_set_ndrectangle(cd, ndr)) | ||
expect_silent(newndr <- tiledb_current_domain_get_ndrectangle(cd)) | ||
expect_silent(newtp <- tiledb_current_domain_get_type(cd)) | ||
expect_true(is(newndr, "tiledb_ndrectangle")) | ||
expect_equal(tiledb_ndrectangle_get_range(newndr, "dim"), c(41L, 42L)) | ||
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## complete example with multiple dims and schema evolution | ||
uri <- tempfile() | ||
dim <- c(tiledb_dim("row", c(1L, 1000L), 50L, type = "INT32"), | ||
tiledb_dim("col", c(1L, 100000L), 500L, type = "INT64"), | ||
tiledb_dim("key", c(NULL, NULL), NULL, type = "ASCII")) | ||
dom <- tiledb_domain(dim = dim) | ||
attr <- tiledb_attr("a", type = "INT32") # unused | ||
sch <- tiledb_array_schema(dom, attrs = attr, sparse = TRUE) | ||
arr <- tiledb_array_create(uri, sch) | ||
expandDomain <- function(uri, upperend=200L, upperkey="dd") { | ||
ase <- tiledb_array_schema_evolution() | ||
sch <- tiledb::schema(uri) | ||
dom <- tiledb::domain(sch) | ||
cd <- tiledb_current_domain() | ||
ndr <- tiledb_ndrectangle(dom) | ||
tiledb_ndrectangle_set_range(ndr, "row", 1L, upperend) | ||
tiledb_ndrectangle_set_range(ndr, "col", bit64::as.integer64(1L), bit64::as.integer64(10 * upperend)) | ||
tiledb_ndrectangle_set_range(ndr, "key", "bb", upperkey) | ||
tiledb_current_domain_set_ndrectangle(cd, ndr) | ||
tiledb_array_schema_evolution_expand_current_domain(ase, cd) | ||
tiledb_array_schema_evolution_array_evolve(ase, uri) | ||
invisible(NULL) | ||
} | ||
expect_silent(expandDomain(uri)) | ||
sch <- tiledb::schema(uri) | ||
cd <- tiledb_array_schema_get_current_domain(sch) | ||
ndr <- tiledb_current_domain_get_ndrectangle(cd) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "row"), c(1, 200)) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "col"), bit64::as.integer64(c(1, 2000))) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "key"), c("bb", "dd")) | ||
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expandDomain(uri, 300L, "ff") | ||
sch <- tiledb::schema(uri) | ||
cd <- tiledb_array_schema_get_current_domain(sch) | ||
ndr <- tiledb_current_domain_get_ndrectangle(cd) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "row"), c(1, 300)) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "col"), bit64::as.integer64(c(1, 3000))) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "key"), c("bb", "ff")) | ||
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expandDomain(uri, 400L, "kk") | ||
sch <- tiledb::schema(uri) | ||
cd <- tiledb_array_schema_get_current_domain(sch) | ||
ndr <- tiledb_current_domain_get_ndrectangle(cd) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "row"), c(1, 400)) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "col"), bit64::as.integer64(c(1, 4000))) | ||
expect_equal(tiledb_ndrectangle_get_range(ndr, "key"), c("bb", "kk")) |
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